fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mediterraneibacter_A butyricigenes KCTC 15684

Genome identifier: GCF_003574295.1

NCBI assembly name: ASM357429v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Mediterraneibacter_A, Mediterraneibacter_A butyricigenes

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Mediterraneibacter, Mediterraneibacter butyricigenes

Scaffolds: 7

Genes: 2,952 Protein-coding: 2,813 RNAs: 64 pseudogenes: 75

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BHGK01000001.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs1, whole genome shotgun sequence 2,916,053
NZ_BHGK01000002.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs2, whole genome shotgun sequence 7,606
NZ_BHGK01000003.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs3, whole genome shotgun sequence 5,175
NZ_BHGK01000004.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs4, whole genome shotgun sequence 62,204
NZ_BHGK01000005.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs5, whole genome shotgun sequence 38,517
NZ_BHGK01000006.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs6, whole genome shotgun sequence 2,275
NZ_BHGK01000007.1 Mediterraneibacter butyricigenes strain KCTC 15684 Contigs7, whole genome shotgun sequence 2,659

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory