fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dongia_A deserti SYSU D60009

Genome identifier: GCF_003574735.1

NCBI assembly name: ASM357473v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Dongiales, Dongiaceae, Dongia_A, Dongia_A deserti

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Dongia, Dongia deserti

Scaffolds: 52

Genes: 5,972 Protein-coding: 5,871 RNAs: 56 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QORW01000001.1 Dongia deserti strain SYSU D60009 s803_Contig1, whole genome shotgun sequence 633,853
NZ_QORW01000002.1 Dongia deserti strain SYSU D60009 s803_Contig2, whole genome shotgun sequence 445,086
NZ_QORW01000003.1 Dongia deserti strain SYSU D60009 s803_Contig3, whole genome shotgun sequence 384,695
NZ_QORW01000004.1 Dongia deserti strain SYSU D60009 s803_Contig4, whole genome shotgun sequence 370,845
NZ_QORW01000005.1 Dongia deserti strain SYSU D60009 s803_Contig5, whole genome shotgun sequence 341,317
NZ_QORW01000006.1 Dongia deserti strain SYSU D60009 s803_Contig6, whole genome shotgun sequence 326,640
NZ_QORW01000007.1 Dongia deserti strain SYSU D60009 s803_Contig7, whole genome shotgun sequence 325,509
NZ_QORW01000008.1 Dongia deserti strain SYSU D60009 s803_Contig8, whole genome shotgun sequence 282,954
NZ_QORW01000009.1 Dongia deserti strain SYSU D60009 s803_Contig9, whole genome shotgun sequence 279,052
NZ_QORW01000010.1 Dongia deserti strain SYSU D60009 s803_Contig10, whole genome shotgun sequence 246,060
NZ_QORW01000011.1 Dongia deserti strain SYSU D60009 s803_Contig11, whole genome shotgun sequence 244,480
NZ_QORW01000012.1 Dongia deserti strain SYSU D60009 s803_Contig12, whole genome shotgun sequence 204,922
NZ_QORW01000013.1 Dongia deserti strain SYSU D60009 s803_Contig13, whole genome shotgun sequence 150,138
NZ_QORW01000014.1 Dongia deserti strain SYSU D60009 s803_Contig14, whole genome shotgun sequence 148,942
NZ_QORW01000015.1 Dongia deserti strain SYSU D60009 s803_Contig15, whole genome shotgun sequence 139,988
NZ_QORW01000016.1 Dongia deserti strain SYSU D60009 s803_Contig16, whole genome shotgun sequence 132,160
NZ_QORW01000017.1 Dongia deserti strain SYSU D60009 s803_Contig17, whole genome shotgun sequence 120,822
NZ_QORW01000018.1 Dongia deserti strain SYSU D60009 s803_Contig18, whole genome shotgun sequence 120,601
NZ_QORW01000019.1 Dongia deserti strain SYSU D60009 s803_Contig19, whole genome shotgun sequence 117,524
NZ_QORW01000020.1 Dongia deserti strain SYSU D60009 s803_Contig20, whole genome shotgun sequence 109,213
NZ_QORW01000021.1 Dongia deserti strain SYSU D60009 s803_Contig21, whole genome shotgun sequence 104,900
NZ_QORW01000022.1 Dongia deserti strain SYSU D60009 s803_Contig22, whole genome shotgun sequence 101,346
NZ_QORW01000023.1 Dongia deserti strain SYSU D60009 s803_Contig23, whole genome shotgun sequence 74,328
NZ_QORW01000024.1 Dongia deserti strain SYSU D60009 s803_Contig24, whole genome shotgun sequence 74,005
NZ_QORW01000025.1 Dongia deserti strain SYSU D60009 s803_Contig25, whole genome shotgun sequence 73,527
NZ_QORW01000026.1 Dongia deserti strain SYSU D60009 s803_Contig26, whole genome shotgun sequence 72,885
NZ_QORW01000027.1 Dongia deserti strain SYSU D60009 s803_Contig27, whole genome shotgun sequence 68,523
NZ_QORW01000028.1 Dongia deserti strain SYSU D60009 s803_Contig28, whole genome shotgun sequence 68,220
NZ_QORW01000029.1 Dongia deserti strain SYSU D60009 s803_Contig29, whole genome shotgun sequence 54,568
NZ_QORW01000030.1 Dongia deserti strain SYSU D60009 s803_Contig30, whole genome shotgun sequence 51,123
NZ_QORW01000031.1 Dongia deserti strain SYSU D60009 s803_Contig31, whole genome shotgun sequence 41,022
NZ_QORW01000032.1 Dongia deserti strain SYSU D60009 s803_Contig32, whole genome shotgun sequence 40,984
NZ_QORW01000033.1 Dongia deserti strain SYSU D60009 s803_Contig33, whole genome shotgun sequence 40,569
NZ_QORW01000034.1 Dongia deserti strain SYSU D60009 s803_Contig34, whole genome shotgun sequence 36,662
NZ_QORW01000035.1 Dongia deserti strain SYSU D60009 s803_Contig35, whole genome shotgun sequence 20,120
NZ_QORW01000036.1 Dongia deserti strain SYSU D60009 s803_Contig36, whole genome shotgun sequence 16,795
NZ_QORW01000037.1 Dongia deserti strain SYSU D60009 s803_Contig37, whole genome shotgun sequence 15,590
NZ_QORW01000038.1 Dongia deserti strain SYSU D60009 s803_Contig38, whole genome shotgun sequence 13,232
NZ_QORW01000039.1 Dongia deserti strain SYSU D60009 s803_Contig39, whole genome shotgun sequence 6,063
NZ_QORW01000040.1 Dongia deserti strain SYSU D60009 s803_Contig40, whole genome shotgun sequence 5,081
NZ_QORW01000041.1 Dongia deserti strain SYSU D60009 s803_Contig41, whole genome shotgun sequence 4,805
NZ_QORW01000042.1 Dongia deserti strain SYSU D60009 s803_Contig42, whole genome shotgun sequence 4,644
NZ_QORW01000043.1 Dongia deserti strain SYSU D60009 s803_Contig43, whole genome shotgun sequence 3,066
NZ_QORW01000044.1 Dongia deserti strain SYSU D60009 s803_Contig44, whole genome shotgun sequence 2,917
NZ_QORW01000045.1 Dongia deserti strain SYSU D60009 s803_Contig45, whole genome shotgun sequence 2,514
NZ_QORW01000046.1 Dongia deserti strain SYSU D60009 s803_Contig46, whole genome shotgun sequence 2,409
NZ_QORW01000047.1 Dongia deserti strain SYSU D60009 s803_Contig47, whole genome shotgun sequence 1,628
NZ_QORW01000048.1 Dongia deserti strain SYSU D60009 s803_Contig48, whole genome shotgun sequence 1,494
NZ_QORW01000049.1 Dongia deserti strain SYSU D60009 s803_Contig49, whole genome shotgun sequence 1,451
NZ_QORW01000050.1 Dongia deserti strain SYSU D60009 s803_Contig50, whole genome shotgun sequence 1,206
NZ_QORW01000051.1 Dongia deserti strain SYSU D60009 s803_Contig51, whole genome shotgun sequence 1,196
NZ_QORW01000052.1 Dongia deserti strain SYSU D60009 s803_Contig52, whole genome shotgun sequence 1,036

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory