fast.genomicscompare 6,575 genera of bacteria & archaea

 

Salinibius halmophilus WDS2A16A

Genome identifier: GCF_003577475.1

NCBI assembly name: ASM357747v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Natronospirillaceae, Salinibius, Salinibius halmophilus

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Saccharospirillaceae, Salinibius, Salinibius halmophilus

Scaffolds: 34

Genes: 3,482 Protein-coding: 3,402 RNAs: 68 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QPEP01000001.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold1, whole genome shotgun sequence 369,484
NZ_QPEP01000002.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold2, whole genome shotgun sequence 357,923
NZ_QPEP01000003.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold3, whole genome shotgun sequence 349,478
NZ_QPEP01000004.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold4, whole genome shotgun sequence 318,232
NZ_QPEP01000005.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold5, whole genome shotgun sequence 255,077
NZ_QPEP01000006.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold6, whole genome shotgun sequence 248,143
NZ_QPEP01000007.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold7, whole genome shotgun sequence 228,859
NZ_QPEP01000008.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold8, whole genome shotgun sequence 204,065
NZ_QPEP01000009.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold9, whole genome shotgun sequence 191,013
NZ_QPEP01000010.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold10, whole genome shotgun sequence 184,113
NZ_QPEP01000011.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold11, whole genome shotgun sequence 174,311
NZ_QPEP01000012.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold12, whole genome shotgun sequence 173,404
NZ_QPEP01000013.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold13, whole genome shotgun sequence 143,607
NZ_QPEP01000014.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold14, whole genome shotgun sequence 115,220
NZ_QPEP01000015.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold15, whole genome shotgun sequence 104,956
NZ_QPEP01000016.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold16, whole genome shotgun sequence 100,911
NZ_QPEP01000017.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold17, whole genome shotgun sequence 98,548
NZ_QPEP01000018.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold18, whole genome shotgun sequence 48,689
NZ_QPEP01000019.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold19, whole genome shotgun sequence 8,535
NZ_QPEP01000020.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold20, whole genome shotgun sequence 7,624
NZ_QPEP01000021.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold21, whole genome shotgun sequence 4,559
NZ_QPEP01000022.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold22, whole genome shotgun sequence 3,106
NZ_QPEP01000023.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold23, whole genome shotgun sequence 1,507
NZ_QPEP01000024.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold24, whole genome shotgun sequence 1,269
NZ_QPEP01000025.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold25, whole genome shotgun sequence 1,120
NZ_QPEP01000026.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold26, whole genome shotgun sequence 982
NZ_QPEP01000027.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold27, whole genome shotgun sequence 938
NZ_QPEP01000028.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold28, whole genome shotgun sequence 877
NZ_QPEP01000029.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold29, whole genome shotgun sequence 809
NZ_QPEP01000030.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold30, whole genome shotgun sequence 759
NZ_QPEP01000031.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold31, whole genome shotgun sequence 695
NZ_QPEP01000032.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold32, whole genome shotgun sequence 636
NZ_QPEP01000033.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold33, whole genome shotgun sequence 616
NZ_QPEP01000034.1 Salinibius halmophilus strain WDS2A16A WDS2A16A_scaffold34, whole genome shotgun sequence 542

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory