fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mangrovibacterium diazotrophicum DSM 27148

Genome identifier: GCF_003610535.1

NCBI assembly name: ASM361053v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Prolixibacteraceae, Mangrovibacterium, Mangrovibacterium diazotrophicum

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Marinilabiliales, Prolixibacteraceae, Mangrovibacterium, Mangrovibacterium diazotrophicum

Scaffolds: 10

Genes: 4,598 Protein-coding: 4,536 RNAs: 59 pseudogenes: 3

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RAPN01000001.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_101, whole genome shotgun sequence 4,108,058
NZ_RAPN01000002.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_102, whole genome shotgun sequence 489,076
NZ_RAPN01000003.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_103, whole genome shotgun sequence 357,803
NZ_RAPN01000004.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_104, whole genome shotgun sequence 314,965
NZ_RAPN01000005.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_105, whole genome shotgun sequence 281,120
NZ_RAPN01000006.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_106, whole genome shotgun sequence 232,723
NZ_RAPN01000007.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_107, whole genome shotgun sequence 8,878
NZ_RAPN01000008.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_108, whole genome shotgun sequence 5,524
NZ_RAPN01000009.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_109, whole genome shotgun sequence 1,263
NZ_RAPN01000010.1 Mangrovibacterium diazotrophicum strain DSM 27148 Ga0131256_110, whole genome shotgun sequence 1,030

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory