fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ulvibacterium marinum CCMM003

Genome identifier: GCF_003626755.1

NCBI assembly name: ASM362675v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Ulvibacterium, Ulvibacterium marinum

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Ulvibacterium, Ulvibacterium marinum

Scaffolds: 14

Genes: 5,065 Protein-coding: 5,000 RNAs: 45 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RBCJ01000001.1 Ulvibacterium marinum strain CCMM003 NODE_1_length_1670967_cov_85.9101, whole genome shotgun sequence 1,670,967
NZ_RBCJ01000002.1 Ulvibacterium marinum strain CCMM003 NODE_2_length_1348314_cov_69.0106, whole genome shotgun sequence 1,348,314
NZ_RBCJ01000003.1 Ulvibacterium marinum strain CCMM003 NODE_3_length_1324838_cov_77.8537, whole genome shotgun sequence 1,324,838
NZ_RBCJ01000004.1 Ulvibacterium marinum strain CCMM003 NODE_4_length_559566_cov_78.145, whole genome shotgun sequence 559,566
NZ_RBCJ01000005.1 Ulvibacterium marinum strain CCMM003 NODE_5_length_481490_cov_72.7568, whole genome shotgun sequence 481,490
NZ_RBCJ01000006.1 Ulvibacterium marinum strain CCMM003 NODE_6_length_401476_cov_70.3685, whole genome shotgun sequence 401,476
NZ_RBCJ01000007.1 Ulvibacterium marinum strain CCMM003 NODE_7_length_57414_cov_69.9286, whole genome shotgun sequence 57,414
NZ_RBCJ01000008.1 Ulvibacterium marinum strain CCMM003 NODE_8_length_50838_cov_88.5671, whole genome shotgun sequence 50,838
NZ_RBCJ01000009.1 Ulvibacterium marinum strain CCMM003 NODE_9_length_5549_cov_123.498, whole genome shotgun sequence 5,549
NZ_RBCJ01000010.1 Ulvibacterium marinum strain CCMM003 NODE_10_length_2912_cov_86.78, whole genome shotgun sequence 2,912
NZ_RBCJ01000011.1 Ulvibacterium marinum strain CCMM003 NODE_11_length_1773_cov_116.385, whole genome shotgun sequence 1,773
NZ_RBCJ01000012.1 Ulvibacterium marinum strain CCMM003 NODE_12_length_1587_cov_147.062, whole genome shotgun sequence 1,587
NZ_RBCJ01000013.1 Ulvibacterium marinum strain CCMM003 NODE_13_length_1179_cov_0.402405, whole genome shotgun sequence 1,179
NZ_RBCJ01000014.1 Ulvibacterium marinum strain CCMM003 NODE_14_length_1081_cov_184.608, whole genome shotgun sequence 1,081

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory