fast.genomicscompare 6,575 genera of bacteria & archaea

 

Coprobacter fastidiosus NSB1

Genome identifier: GCF_003634345.1

NCBI assembly name: ASM363434v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Coprobacteraceae, Coprobacter, Coprobacter fastidiosus

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Barnesiellaceae, Coprobacter, Coprobacter fastidiosus

Scaffolds: 19

Genes: 2,706 Protein-coding: 2,615 RNAs: 62 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RBXN01000001.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_101, whole genome shotgun sequence 738,067
NZ_RBXN01000002.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_102, whole genome shotgun sequence 542,994
NZ_RBXN01000003.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_103, whole genome shotgun sequence 381,906
NZ_RBXN01000004.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_104, whole genome shotgun sequence 312,965
NZ_RBXN01000005.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_105, whole genome shotgun sequence 250,246
NZ_RBXN01000006.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_106, whole genome shotgun sequence 226,410
NZ_RBXN01000007.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_107, whole genome shotgun sequence 221,825
NZ_RBXN01000008.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_108, whole genome shotgun sequence 200,710
NZ_RBXN01000009.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_109, whole genome shotgun sequence 162,542
NZ_RBXN01000010.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_110, whole genome shotgun sequence 129,557
NZ_RBXN01000011.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_111, whole genome shotgun sequence 85,140
NZ_RBXN01000012.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_112, whole genome shotgun sequence 67,666
NZ_RBXN01000013.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_113, whole genome shotgun sequence 62,154
NZ_RBXN01000014.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_114, whole genome shotgun sequence 14,718
NZ_RBXN01000015.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_115, whole genome shotgun sequence 5,309
NZ_RBXN01000016.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_116, whole genome shotgun sequence 3,607
NZ_RBXN01000017.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_117, whole genome shotgun sequence 3,037
NZ_RBXN01000018.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_118, whole genome shotgun sequence 1,640
NZ_RBXN01000019.1 Coprobacter fastidiosus NSB1 = JCM 33896 strain NSB1 Ga0131254_119, whole genome shotgun sequence 1,327

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory