fast.genomicscompare 6,575 genera of bacteria & archaea

 

Chachezhania antarctica SM1703

Genome identifier: GCF_003646465.1

NCBI assembly name: ASM364646v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Chachezhania, Chachezhania antarctica

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Chachezhania, Chachezhania antarctica

Scaffolds: 50

Genes: 4,804 Protein-coding: 4,697 RNAs: 49 pseudogenes: 58

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QZEX01000001.1 Chachezhania antarctica strain SM1703 scaffold1, whole genome shotgun sequence 786,633
NZ_QZEX01000002.1 Chachezhania antarctica strain SM1703 scaffold2, whole genome shotgun sequence 743,836
NZ_QZEX01000003.1 Chachezhania antarctica strain SM1703 scaffold3, whole genome shotgun sequence 419,688
NZ_QZEX01000004.1 Chachezhania antarctica strain SM1703 scaffold4, whole genome shotgun sequence 394,026
NZ_QZEX01000005.1 Chachezhania antarctica strain SM1703 scaffold5, whole genome shotgun sequence 368,648
NZ_QZEX01000006.1 Chachezhania antarctica strain SM1703 scaffold6, whole genome shotgun sequence 366,511
NZ_QZEX01000007.1 Chachezhania antarctica strain SM1703 scaffold7, whole genome shotgun sequence 324,521
NZ_QZEX01000008.1 Chachezhania antarctica strain SM1703 scaffold8, whole genome shotgun sequence 192,225
NZ_QZEX01000009.1 Chachezhania antarctica strain SM1703 scaffold9, whole genome shotgun sequence 186,141
NZ_QZEX01000010.1 Chachezhania antarctica strain SM1703 scaffold10, whole genome shotgun sequence 165,999
NZ_QZEX01000011.1 Chachezhania antarctica strain SM1703 scaffold11, whole genome shotgun sequence 140,708
NZ_QZEX01000012.1 Chachezhania antarctica strain SM1703 scaffold12, whole genome shotgun sequence 128,087
NZ_QZEX01000013.1 Chachezhania antarctica strain SM1703 scaffold13, whole genome shotgun sequence 116,634
NZ_QZEX01000014.1 Chachezhania antarctica strain SM1703 scaffold14, whole genome shotgun sequence 108,989
NZ_QZEX01000015.1 Chachezhania antarctica strain SM1703 scaffold15, whole genome shotgun sequence 90,849
NZ_QZEX01000016.1 Chachezhania antarctica strain SM1703 scaffold16, whole genome shotgun sequence 78,410
NZ_QZEX01000017.1 Chachezhania antarctica strain SM1703 scaffold17, whole genome shotgun sequence 72,855
NZ_QZEX01000018.1 Chachezhania antarctica strain SM1703 scaffold18, whole genome shotgun sequence 54,930
NZ_QZEX01000019.1 Chachezhania antarctica strain SM1703 scaffold19, whole genome shotgun sequence 53,226
NZ_QZEX01000020.1 Chachezhania antarctica strain SM1703 scaffold20, whole genome shotgun sequence 47,330
NZ_QZEX01000021.1 Chachezhania antarctica strain SM1703 scaffold21, whole genome shotgun sequence 41,041
NZ_QZEX01000022.1 Chachezhania antarctica strain SM1703 scaffold22, whole genome shotgun sequence 35,682
NZ_QZEX01000023.1 Chachezhania antarctica strain SM1703 scaffold23, whole genome shotgun sequence 24,174
NZ_QZEX01000024.1 Chachezhania antarctica strain SM1703 scaffold24, whole genome shotgun sequence 23,278
NZ_QZEX01000025.1 Chachezhania antarctica strain SM1703 scaffold25, whole genome shotgun sequence 20,861
NZ_QZEX01000026.1 Chachezhania antarctica strain SM1703 scaffold26, whole genome shotgun sequence 6,239
NZ_QZEX01000027.1 Chachezhania antarctica strain SM1703 scaffold27, whole genome shotgun sequence 5,797
NZ_QZEX01000028.1 Chachezhania antarctica strain SM1703 scaffold28, whole genome shotgun sequence 5,492
NZ_QZEX01000029.1 Chachezhania antarctica strain SM1703 scaffold29, whole genome shotgun sequence 4,405
NZ_QZEX01000030.1 Chachezhania antarctica strain SM1703 scaffold30, whole genome shotgun sequence 3,795
NZ_QZEX01000031.1 Chachezhania antarctica strain SM1703 scaffold31, whole genome shotgun sequence 3,581
NZ_QZEX01000032.1 Chachezhania antarctica strain SM1703 scaffold32, whole genome shotgun sequence 3,225
NZ_QZEX01000033.1 Chachezhania antarctica strain SM1703 scaffold33, whole genome shotgun sequence 3,164
NZ_QZEX01000034.1 Chachezhania antarctica strain SM1703 scaffold34, whole genome shotgun sequence 2,511
NZ_QZEX01000035.1 Chachezhania antarctica strain SM1703 scaffold35, whole genome shotgun sequence 2,305
NZ_QZEX01000036.1 Chachezhania antarctica strain SM1703 scaffold36, whole genome shotgun sequence 2,190
NZ_QZEX01000037.1 Chachezhania antarctica strain SM1703 scaffold37, whole genome shotgun sequence 1,717
NZ_QZEX01000038.1 Chachezhania antarctica strain SM1703 scaffold38, whole genome shotgun sequence 1,510
NZ_QZEX01000039.1 Chachezhania antarctica strain SM1703 scaffold39, whole genome shotgun sequence 1,456
NZ_QZEX01000040.1 Chachezhania antarctica strain SM1703 scaffold40, whole genome shotgun sequence 1,294
NZ_QZEX01000041.1 Chachezhania antarctica strain SM1703 scaffold41, whole genome shotgun sequence 1,250
NZ_QZEX01000042.1 Chachezhania antarctica strain SM1703 scaffold42, whole genome shotgun sequence 1,036
NZ_QZEX01000043.1 Chachezhania antarctica strain SM1703 scaffold43, whole genome shotgun sequence 881
NZ_QZEX01000044.1 Chachezhania antarctica strain SM1703 scaffold44, whole genome shotgun sequence 656
NZ_QZEX01000045.1 Chachezhania antarctica strain SM1703 scaffold45, whole genome shotgun sequence 518
NZ_QZEX01000046.1 Chachezhania antarctica strain SM1703 scaffold46, whole genome shotgun sequence 469
NZ_QZEX01000047.1 Chachezhania antarctica strain SM1703 scaffold47, whole genome shotgun sequence 400
NZ_QZEX01000048.1 Chachezhania antarctica strain SM1703 scaffold48, whole genome shotgun sequence 333
NZ_QZEX01000049.1 Chachezhania antarctica strain SM1703 scaffold49, whole genome shotgun sequence 320
NZ_QZEX01000050.1 Chachezhania antarctica strain SM1703 scaffold50, whole genome shotgun sequence 315

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory