fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halostella salina CBA1114

Genome identifier: GCF_003675855.1

NCBI assembly name: ASM367585v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, QS-9-68-17, Halostella, Halostella salina

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Natronoarchaeaceae, Halostella, Halostella salina

Scaffolds: 17

Genes: 3,893 Protein-coding: 3,787 RNAs: 58 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RCIH01000001.1 Halostella salina strain CBA1114 Scaffold1_1, whole genome shotgun sequence 655,689
NZ_RCIH01000002.1 Halostella salina strain CBA1114 Scaffold2_1, whole genome shotgun sequence 559,260
NZ_RCIH01000003.1 Halostella salina strain CBA1114 Scaffold3_1, whole genome shotgun sequence 461,364
NZ_RCIH01000004.1 Halostella salina strain CBA1114 Scaffold4_1, whole genome shotgun sequence 375,332
NZ_RCIH01000005.1 Halostella salina strain CBA1114 Scaffold5_1, whole genome shotgun sequence 317,681
NZ_RCIH01000006.1 Halostella salina strain CBA1114 Scaffold6_1, whole genome shotgun sequence 279,960
NZ_RCIH01000007.1 Halostella salina strain CBA1114 Scaffold7_1, whole genome shotgun sequence 258,619
NZ_RCIH01000008.1 Halostella salina strain CBA1114 Scaffold8_1, whole genome shotgun sequence 246,304
NZ_RCIH01000009.1 Halostella salina strain CBA1114 Scaffold9_1, whole genome shotgun sequence 192,860
NZ_RCIH01000010.1 Halostella salina strain CBA1114 Scaffold10_1, whole genome shotgun sequence 113,342
NZ_RCIH01000011.1 Halostella salina strain CBA1114 Scaffold11_1, whole genome shotgun sequence 95,578
NZ_RCIH01000012.1 Halostella salina strain CBA1114 Scaffold12_1, whole genome shotgun sequence 85,394
NZ_RCIH01000013.1 Halostella salina strain CBA1114 Scaffold13_1, whole genome shotgun sequence 77,416
NZ_RCIH01000014.1 Halostella salina strain CBA1114 Scaffold14_1, whole genome shotgun sequence 9,069
NZ_RCIH01000015.1 Halostella salina strain CBA1114 Scaffold15_1, whole genome shotgun sequence 5,284
NZ_RCIH01000016.1 Halostella salina strain CBA1114 Scaffold16_1, whole genome shotgun sequence 1,434
NZ_RCIH01000017.1 Halostella salina strain CBA1114 Scaffold17_1, whole genome shotgun sequence 939

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory