fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodophyticola porphyridii MA-7-27

Genome identifier: GCF_003688285.1

NCBI assembly name: ASM368828v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Rhodophyticola, Rhodophyticola porphyridii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Rhodophyticola, Rhodophyticola porphyridii

Scaffolds: 22

Genes: 3,801 Protein-coding: 3,702 RNAs: 47 pseudogenes: 52

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RCNT01000001.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_1, whole genome shotgun sequence 895,572
NZ_RCNT01000002.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_2, whole genome shotgun sequence 463,957
NZ_RCNT01000003.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_3, whole genome shotgun sequence 418,581
NZ_RCNT01000004.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_4, whole genome shotgun sequence 338,091
NZ_RCNT01000005.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_5, whole genome shotgun sequence 337,224
NZ_RCNT01000006.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_6, whole genome shotgun sequence 297,419
NZ_RCNT01000007.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_7, whole genome shotgun sequence 290,153
NZ_RCNT01000008.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_8, whole genome shotgun sequence 193,526
NZ_RCNT01000009.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_9, whole genome shotgun sequence 180,999
NZ_RCNT01000010.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_10, whole genome shotgun sequence 178,760
NZ_RCNT01000011.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_11, whole genome shotgun sequence 64,773
NZ_RCNT01000012.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_12, whole genome shotgun sequence 43,993
NZ_RCNT01000013.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_13, whole genome shotgun sequence 43,898
NZ_RCNT01000014.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_14, whole genome shotgun sequence 27,919
NZ_RCNT01000015.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_15, whole genome shotgun sequence 24,429
NZ_RCNT01000016.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_16, whole genome shotgun sequence 15,198
NZ_RCNT01000017.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_17, whole genome shotgun sequence 8,030
NZ_RCNT01000018.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_18, whole genome shotgun sequence 7,465
NZ_RCNT01000019.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_19, whole genome shotgun sequence 2,551
NZ_RCNT01000020.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_20, whole genome shotgun sequence 1,967
NZ_RCNT01000021.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_21, whole genome shotgun sequence 1,597
NZ_RCNT01000022.1 Rhodophyticola porphyridii strain MA-7-27 PoM0330_22, whole genome shotgun sequence 1,213

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory