fast.genomicscompare 6,575 genera of bacteria & archaea

 

Inmirania thermothiophila DSM 100275

Genome identifier: GCF_003751635.1

NCBI assembly name: ASM375163v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, DSM-100275, DSM-100275, Inmirania, Inmirania thermothiophila

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Inmirania, Inmirania thermothiophila

Scaffolds: 5

Genes: 2,543 Protein-coding: 2,464 RNAs: 52 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RJVI01000001.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_11, whole genome shotgun sequence 1,161,603
NZ_RJVI01000002.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_12, whole genome shotgun sequence 1,064,482
NZ_RJVI01000003.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_13, whole genome shotgun sequence 374,229
NZ_RJVI01000004.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_14, whole genome shotgun sequence 6,669
NZ_RJVI01000005.1 Inmirania thermothiophila strain DSM 100275 Ga0244718_15, whole genome shotgun sequence 1,735

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory