fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinimicrobium koreense DSM 16974

Genome identifier: GCF_003762925.1

NCBI assembly name: ASM376292v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Cellvibrionaceae, Marinimicrobium, Marinimicrobium koreense

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Cellvibrionaceae, Marinimicrobium, Marinimicrobium koreense

Scaffolds: 6

Genes: 3,266 Protein-coding: 3,208 RNAs: 50 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RJUK01000001.1 Marinimicrobium koreense strain DSM 16974 Ga0244674_11, whole genome shotgun sequence 2,933,428
NZ_RJUK01000002.1 Marinimicrobium koreense strain DSM 16974 Ga0244674_12, whole genome shotgun sequence 509,251
NZ_RJUK01000003.1 Marinimicrobium koreense strain DSM 16974 Ga0244674_13, whole genome shotgun sequence 266,366
NZ_RJUK01000004.1 Marinimicrobium koreense strain DSM 16974 Ga0244674_14, whole genome shotgun sequence 131,831
NZ_RJUK01000005.1 Marinimicrobium koreense strain DSM 16974 Ga0244674_15, whole genome shotgun sequence 6,190
NZ_RJUK01000006.1 Marinimicrobium koreense strain DSM 16974 Ga0244674_16, whole genome shotgun sequence 1,350

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory