fast.genomicscompare 6,575 genera of bacteria & archaea

 

Vulcaniibacterium tengchongense DSM 25623

Genome identifier: GCF_003814555.1

NCBI assembly name: ASM381455v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Vulcaniibacterium, Vulcaniibacterium tengchongense

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Vulcaniibacterium, Vulcaniibacterium tengchongense

Scaffolds: 16

Genes: 3,257 Protein-coding: 3,151 RNAs: 53 pseudogenes: 53

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RKQN01000001.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_101, whole genome shotgun sequence 1,407,108
NZ_RKQN01000002.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_102, whole genome shotgun sequence 909,848
NZ_RKQN01000003.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_103, whole genome shotgun sequence 571,983
NZ_RKQN01000004.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_104, whole genome shotgun sequence 303,842
NZ_RKQN01000005.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_105, whole genome shotgun sequence 124,650
NZ_RKQN01000006.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_106, whole genome shotgun sequence 103,270
NZ_RKQN01000007.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_107, whole genome shotgun sequence 67,077
NZ_RKQN01000008.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_108, whole genome shotgun sequence 39,043
NZ_RKQN01000009.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_109, whole genome shotgun sequence 24,821
NZ_RKQN01000010.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_110, whole genome shotgun sequence 16,662
NZ_RKQN01000011.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_111, whole genome shotgun sequence 6,057
NZ_RKQN01000012.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_112, whole genome shotgun sequence 4,079
NZ_RKQN01000013.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_113, whole genome shotgun sequence 2,330
NZ_RKQN01000014.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_114, whole genome shotgun sequence 2,043
NZ_RKQN01000015.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_115, whole genome shotgun sequence 1,658
NZ_RKQN01000016.1 Vulcaniibacterium tengchongense strain DSM 25623 Ga0244695_116, whole genome shotgun sequence 1,300

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory