fast.genomicscompare 6,575 genera of bacteria & archaea

 

Hydrogenoanaerobacterium saccharovorans DSM 24774

Genome identifier: GCF_003814745.1

NCBI assembly name: ASM381474v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Hydrogenoanaerobacterium, Hydrogenoanaerobacterium saccharovorans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Hydrogenoanaerobacterium, Hydrogenoanaerobacterium saccharovorans

Scaffolds: 8

Genes: 2,996 Protein-coding: 2,908 RNAs: 66 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RKRD01000001.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_11, whole genome shotgun sequence 2,151,482
NZ_RKRD01000002.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_12, whole genome shotgun sequence 444,419
NZ_RKRD01000003.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_13, whole genome shotgun sequence 284,025
NZ_RKRD01000004.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_14, whole genome shotgun sequence 182,023
NZ_RKRD01000005.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_15, whole genome shotgun sequence 58,072
NZ_RKRD01000006.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_16, whole genome shotgun sequence 42,272
NZ_RKRD01000007.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_17, whole genome shotgun sequence 8,362
NZ_RKRD01000008.1 Hydrogenoanaerobacterium saccharovorans strain DSM 24774 Ga0244692_18, whole genome shotgun sequence 5,592

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory