fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thermodesulfitimonas autotrophica DSM 102936

Genome identifier: GCF_003815015.1

NCBI assembly name: ASM381501v1

GTDB taxonomy: Bacteria, Bacillota_B, Desulfotomaculia, Ammonifexales, Ammonificaceae, Thermodesulfitimonas, Thermodesulfitimonas autotrophica

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Thermoanaerobacterales, Thermoanaerobacteraceae, Thermodesulfitimonas, Thermodesulfitimonas autotrophica

Scaffolds: 6

Genes: 2,233 Protein-coding: 2,162 RNAs: 56 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RKRE01000001.1 Thermodesulfitimonas autotrophica strain DSM 102936 Ga0244728_11, whole genome shotgun sequence 766,366
NZ_RKRE01000002.1 Thermodesulfitimonas autotrophica strain DSM 102936 Ga0244728_12, whole genome shotgun sequence 725,084
NZ_RKRE01000003.1 Thermodesulfitimonas autotrophica strain DSM 102936 Ga0244728_13, whole genome shotgun sequence 652,447
NZ_RKRE01000004.1 Thermodesulfitimonas autotrophica strain DSM 102936 Ga0244728_14, whole genome shotgun sequence 29,728
NZ_RKRE01000005.1 Thermodesulfitimonas autotrophica strain DSM 102936 Ga0244728_15, whole genome shotgun sequence 2,930
NZ_RKRE01000006.1 Thermodesulfitimonas autotrophica strain DSM 102936 Ga0244728_16, whole genome shotgun sequence 1,186

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory