Genome identifier: GCF_003862495.1
NCBI assembly name: ASM386249v1
GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloarculaceae, Halocatena, Halocatena pleomorpha
NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Haloarculaceae, Halocatena, Halocatena pleomorpha
Scaffolds: 61
Genes: 3,627 Protein-coding: 3,469 RNAs: 52 pseudogenes: 106
GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)
| scaffoldId | description | length |
|---|---|---|
| NZ_RRCH01000001.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_1, whole genome shotgun sequence | 52,597 |
| NZ_RRCH01000002.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_2, whole genome shotgun sequence | 144,676 |
| NZ_RRCH01000003.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_3, whole genome shotgun sequence | 467,095 |
| NZ_RRCH01000004.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_4, whole genome shotgun sequence | 74,289 |
| NZ_RRCH01000005.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_5, whole genome shotgun sequence | 23,817 |
| NZ_RRCH01000006.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_6, whole genome shotgun sequence | 44,161 |
| NZ_RRCH01000007.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_7, whole genome shotgun sequence | 47,714 |
| NZ_RRCH01000008.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_8, whole genome shotgun sequence | 98,837 |
| NZ_RRCH01000009.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_9, whole genome shotgun sequence | 59,394 |
| NZ_RRCH01000010.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_10, whole genome shotgun sequence | 66,204 |
| NZ_RRCH01000011.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_11, whole genome shotgun sequence | 98,229 |
| NZ_RRCH01000012.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_12, whole genome shotgun sequence | 86,820 |
| NZ_RRCH01000013.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_13, whole genome shotgun sequence | 40,610 |
| NZ_RRCH01000014.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_14, whole genome shotgun sequence | 258,095 |
| NZ_RRCH01000015.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_15, whole genome shotgun sequence | 28,677 |
| NZ_RRCH01000016.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_16, whole genome shotgun sequence | 49,060 |
| NZ_RRCH01000017.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_17, whole genome shotgun sequence | 97,815 |
| NZ_RRCH01000018.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_18, whole genome shotgun sequence | 23,763 |
| NZ_RRCH01000019.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_19, whole genome shotgun sequence | 81,772 |
| NZ_RRCH01000020.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_20, whole genome shotgun sequence | 15,767 |
| NZ_RRCH01000021.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_21, whole genome shotgun sequence | 136,980 |
| NZ_RRCH01000022.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_22, whole genome shotgun sequence | 161,765 |
| NZ_RRCH01000023.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_23, whole genome shotgun sequence | 131,584 |
| NZ_RRCH01000024.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_24, whole genome shotgun sequence | 76,497 |
| NZ_RRCH01000025.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_25, whole genome shotgun sequence | 21,451 |
| NZ_RRCH01000026.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_26, whole genome shotgun sequence | 30,877 |
| NZ_RRCH01000027.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_27, whole genome shotgun sequence | 49,649 |
| NZ_RRCH01000028.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_28, whole genome shotgun sequence | 275,506 |
| NZ_RRCH01000029.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_29, whole genome shotgun sequence | 157,152 |
| NZ_RRCH01000030.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_30, whole genome shotgun sequence | 25,130 |
| NZ_RRCH01000031.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_31, whole genome shotgun sequence | 116,484 |
| NZ_RRCH01000032.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_32, whole genome shotgun sequence | 36,716 |
| NZ_RRCH01000033.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_33, whole genome shotgun sequence | 64,587 |
| NZ_RRCH01000034.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_34, whole genome shotgun sequence | 22,523 |
| NZ_RRCH01000035.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_35, whole genome shotgun sequence | 27,446 |
| NZ_RRCH01000036.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_36, whole genome shotgun sequence | 45,551 |
| NZ_RRCH01000037.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_37, whole genome shotgun sequence | 41,657 |
| NZ_RRCH01000038.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_38, whole genome shotgun sequence | 42,949 |
| NZ_RRCH01000039.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_39, whole genome shotgun sequence | 37,232 |
| NZ_RRCH01000040.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_40, whole genome shotgun sequence | 61,423 |
| NZ_RRCH01000041.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_41, whole genome shotgun sequence | 18,294 |
| NZ_RRCH01000042.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_42, whole genome shotgun sequence | 51,534 |
| NZ_RRCH01000043.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_43, whole genome shotgun sequence | 1,858 |
| NZ_RRCH01000044.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_44, whole genome shotgun sequence | 11,108 |
| NZ_RRCH01000045.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_45, whole genome shotgun sequence | 33,344 |
| NZ_RRCH01000046.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_46, whole genome shotgun sequence | 16,880 |
| NZ_RRCH01000047.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_47, whole genome shotgun sequence | 13,311 |
| NZ_RRCH01000048.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_48, whole genome shotgun sequence | 11,600 |
| NZ_RRCH01000049.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_49, whole genome shotgun sequence | 20,373 |
| NZ_RRCH01000050.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_50, whole genome shotgun sequence | 10,788 |
| NZ_RRCH01000051.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_51, whole genome shotgun sequence | 3,889 |
| NZ_RRCH01000052.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_52, whole genome shotgun sequence | 13,878 |
| NZ_RRCH01000053.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_53, whole genome shotgun sequence | 3,200 |
| NZ_RRCH01000054.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_54, whole genome shotgun sequence | 10,472 |
| NZ_RRCH01000055.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_55, whole genome shotgun sequence | 1,893 |
| NZ_RRCH01000056.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_56, whole genome shotgun sequence | 1,425 |
| NZ_RRCH01000057.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_57, whole genome shotgun sequence | 1,716 |
| NZ_RRCH01000058.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_58, whole genome shotgun sequence | 2,099 |
| NZ_RRCH01000059.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_59, whole genome shotgun sequence | 1,512 |
| NZ_RRCH01000060.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_60, whole genome shotgun sequence | 1,000 |
| NZ_RRCH01000061.1 | Halocatena pleomorpha strain SPP-AMP-1 SPP-M1-1.IonXpress_2017_trimmed_contig_61, whole genome shotgun sequence | 1,964 |