fast.genomicscompare 6,575 genera of bacteria & archaea

 

Altericroceibacterium_A xinjiangense CCTCC AB 207166

Genome identifier: GCF_003958635.1

NCBI assembly name: ASM395863v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Altericroceibacterium_A, Altericroceibacterium_A xinjiangense

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Altericroceibacterium, Altericroceibacterium xinjiangense

Scaffolds: 59

Genes: 3,003 Protein-coding: 2,887 RNAs: 53 pseudogenes: 63

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RSEK01000001.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_1_length_448561_cov_334.245144, whole genome shotgun sequence 448,561
NZ_RSEK01000002.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_2_length_351571_cov_302.802859, whole genome shotgun sequence 351,571
NZ_RSEK01000003.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_3_length_317189_cov_283.062347, whole genome shotgun sequence 317,189
NZ_RSEK01000004.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_4_length_302978_cov_339.870268, whole genome shotgun sequence 302,978
NZ_RSEK01000005.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_5_length_255758_cov_378.353487, whole genome shotgun sequence 255,758
NZ_RSEK01000006.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_6_length_219850_cov_303.091453, whole genome shotgun sequence 219,850
NZ_RSEK01000007.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_7_length_203883_cov_318.089953, whole genome shotgun sequence 203,883
NZ_RSEK01000008.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_8_length_158342_cov_359.954077, whole genome shotgun sequence 158,342
NZ_RSEK01000009.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_9_length_125321_cov_286.781307, whole genome shotgun sequence 125,321
NZ_RSEK01000010.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_10_length_89715_cov_932.012182, whole genome shotgun sequence 89,715
NZ_RSEK01000011.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_11_length_71287_cov_376.048266, whole genome shotgun sequence 71,287
NZ_RSEK01000012.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_12_length_57743_cov_280.631360, whole genome shotgun sequence 57,743
NZ_RSEK01000013.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_13_length_46410_cov_260.838430, whole genome shotgun sequence 46,410
NZ_RSEK01000014.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_14_length_40934_cov_279.642901, whole genome shotgun sequence 40,934
NZ_RSEK01000015.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_15_length_35934_cov_282.905123, whole genome shotgun sequence 35,934
NZ_RSEK01000016.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_16_length_32874_cov_274.237766, whole genome shotgun sequence 32,874
NZ_RSEK01000017.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_17_length_32072_cov_309.147711, whole genome shotgun sequence 32,072
NZ_RSEK01000018.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_18_length_21276_cov_267.491014, whole genome shotgun sequence 21,276
NZ_RSEK01000019.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_19_length_18882_cov_235.271045, whole genome shotgun sequence 18,882
NZ_RSEK01000020.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_20_length_18272_cov_380.405496, whole genome shotgun sequence 18,272
NZ_RSEK01000021.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_21_length_15001_cov_280.658336, whole genome shotgun sequence 15,001
NZ_RSEK01000022.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_22_length_14349_cov_355.780339, whole genome shotgun sequence 14,349
NZ_RSEK01000023.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_23_length_11656_cov_244.153122, whole genome shotgun sequence 11,656
NZ_RSEK01000024.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_24_length_11458_cov_271.445919, whole genome shotgun sequence 11,458
NZ_RSEK01000025.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_25_length_10723_cov_267.961958, whole genome shotgun sequence 10,723
NZ_RSEK01000026.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_26_length_10034_cov_236.203676, whole genome shotgun sequence 10,034
NZ_RSEK01000027.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_27_length_9892_cov_355.375344, whole genome shotgun sequence 9,892
NZ_RSEK01000028.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_28_length_9511_cov_337.014522, whole genome shotgun sequence 9,511
NZ_RSEK01000029.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_29_length_9277_cov_310.636196, whole genome shotgun sequence 9,277
NZ_RSEK01000030.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_30_length_8884_cov_269.132622, whole genome shotgun sequence 8,884
NZ_RSEK01000031.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_31_length_8835_cov_355.315940, whole genome shotgun sequence 8,835
NZ_RSEK01000032.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_32_length_8570_cov_362.445426, whole genome shotgun sequence 8,570
NZ_RSEK01000033.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_33_length_8377_cov_366.314578, whole genome shotgun sequence 8,377
NZ_RSEK01000034.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_34_length_7792_cov_240.744264, whole genome shotgun sequence 7,792
NZ_RSEK01000035.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_35_length_7633_cov_261.899947, whole genome shotgun sequence 7,633
NZ_RSEK01000036.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_36_length_7491_cov_230.187483, whole genome shotgun sequence 7,491
NZ_RSEK01000037.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_37_length_6941_cov_335.452069, whole genome shotgun sequence 6,941
NZ_RSEK01000038.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_38_length_6808_cov_252.747734, whole genome shotgun sequence 6,808
NZ_RSEK01000039.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_39_length_6784_cov_273.639630, whole genome shotgun sequence 6,784
NZ_RSEK01000040.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_40_length_6506_cov_258.169700, whole genome shotgun sequence 6,506
NZ_RSEK01000041.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_41_length_6421_cov_269.429224, whole genome shotgun sequence 6,421
NZ_RSEK01000042.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_42_length_5838_cov_534.883180, whole genome shotgun sequence 5,838
NZ_RSEK01000043.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_43_length_5776_cov_2142.519038, whole genome shotgun sequence 5,776
NZ_RSEK01000044.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_44_length_4949_cov_349.800903, whole genome shotgun sequence 4,949
NZ_RSEK01000045.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_45_length_4463_cov_233.262654, whole genome shotgun sequence 4,463
NZ_RSEK01000046.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_46_length_4064_cov_257.429897, whole genome shotgun sequence 4,064
NZ_RSEK01000047.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_47_length_4052_cov_371.390440, whole genome shotgun sequence 4,052
NZ_RSEK01000048.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_48_length_3927_cov_566.460260, whole genome shotgun sequence 3,927
NZ_RSEK01000049.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_49_length_3449_cov_359.764828, whole genome shotgun sequence 3,449
NZ_RSEK01000050.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_50_length_3415_cov_294.460755, whole genome shotgun sequence 3,415
NZ_RSEK01000051.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_51_length_3379_cov_315.661114, whole genome shotgun sequence 3,379
NZ_RSEK01000052.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_52_length_3321_cov_581.119605, whole genome shotgun sequence 3,321
NZ_RSEK01000053.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_53_length_2831_cov_258.346042, whole genome shotgun sequence 2,831
NZ_RSEK01000054.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_54_length_2672_cov_246.897110, whole genome shotgun sequence 2,672
NZ_RSEK01000055.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_55_length_2672_cov_226.749518, whole genome shotgun sequence 2,672
NZ_RSEK01000056.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_56_length_2656_cov_252.631252, whole genome shotgun sequence 2,656
NZ_RSEK01000057.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_57_length_2577_cov_1516.210400, whole genome shotgun sequence 2,577
NZ_RSEK01000058.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_58_length_2387_cov_591.506926, whole genome shotgun sequence 2,387
NZ_RSEK01000059.1 Altericroceibacterium xinjiangense strain CCTCC AB 207166 NODE_59_length_2357_cov_536.103509, whole genome shotgun sequence 2,357

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory