fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylobacter_A oryzae KRF1

Genome identifier: GCF_003994235.2

NCBI assembly name: ASM399423v2

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylomonadaceae, Methylobacter_A, Methylobacter_A oryzae

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Methylococcales, Methylococcaceae, Methylobacter, Candidatus Methylobacter oryzae

Scaffolds: 121

Genes: 4,465 Protein-coding: 4,377 RNAs: 46 pseudogenes: 42

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RYFG02000001.1 Candidatus Methylobacter oryzae strain KRF1 scaffold1, whole genome shotgun sequence 1,434
NZ_RYFG02000002.1 Candidatus Methylobacter oryzae strain KRF1 scaffold4, whole genome shotgun sequence 12,047
NZ_RYFG02000003.1 Candidatus Methylobacter oryzae strain KRF1 scaffold5, whole genome shotgun sequence 7,332
NZ_RYFG02000004.1 Candidatus Methylobacter oryzae strain KRF1 scaffold6, whole genome shotgun sequence 27,755
NZ_RYFG02000005.1 Candidatus Methylobacter oryzae strain KRF1 scaffold7, whole genome shotgun sequence 105,884
NZ_RYFG02000006.1 Candidatus Methylobacter oryzae strain KRF1 scaffold8, whole genome shotgun sequence 5,347
NZ_RYFG02000007.1 Candidatus Methylobacter oryzae strain KRF1 scaffold9, whole genome shotgun sequence 29,659
NZ_RYFG02000008.1 Candidatus Methylobacter oryzae strain KRF1 scaffold10, whole genome shotgun sequence 54,605
NZ_RYFG02000009.1 Candidatus Methylobacter oryzae strain KRF1 scaffold13, whole genome shotgun sequence 206,422
NZ_RYFG02000010.1 Candidatus Methylobacter oryzae strain KRF1 scaffold14, whole genome shotgun sequence 181,753
NZ_RYFG02000011.1 Candidatus Methylobacter oryzae strain KRF1 scaffold15, whole genome shotgun sequence 15,653
NZ_RYFG02000012.1 Candidatus Methylobacter oryzae strain KRF1 scaffold16, whole genome shotgun sequence 28,586
NZ_RYFG02000013.1 Candidatus Methylobacter oryzae strain KRF1 scaffold17, whole genome shotgun sequence 19,711
NZ_RYFG02000014.1 Candidatus Methylobacter oryzae strain KRF1 scaffold18, whole genome shotgun sequence 45,491
NZ_RYFG02000015.1 Candidatus Methylobacter oryzae strain KRF1 scaffold22, whole genome shotgun sequence 8,649
NZ_RYFG02000016.1 Candidatus Methylobacter oryzae strain KRF1 scaffold23, whole genome shotgun sequence 2,912
NZ_RYFG02000017.1 Candidatus Methylobacter oryzae strain KRF1 scaffold24, whole genome shotgun sequence 15,345
NZ_RYFG02000018.1 Candidatus Methylobacter oryzae strain KRF1 scaffold25, whole genome shotgun sequence 44,484
NZ_RYFG02000019.1 Candidatus Methylobacter oryzae strain KRF1 scaffold26, whole genome shotgun sequence 75,673
NZ_RYFG02000020.1 Candidatus Methylobacter oryzae strain KRF1 scaffold27, whole genome shotgun sequence 69,743
NZ_RYFG02000021.1 Candidatus Methylobacter oryzae strain KRF1 scaffold28, whole genome shotgun sequence 31,018
NZ_RYFG02000022.1 Candidatus Methylobacter oryzae strain KRF1 scaffold29, whole genome shotgun sequence 36,294
NZ_RYFG02000023.1 Candidatus Methylobacter oryzae strain KRF1 scaffold30, whole genome shotgun sequence 31,720
NZ_RYFG02000024.1 Candidatus Methylobacter oryzae strain KRF1 scaffold31, whole genome shotgun sequence 59,672
NZ_RYFG02000025.1 Candidatus Methylobacter oryzae strain KRF1 scaffold32, whole genome shotgun sequence 158,574
NZ_RYFG02000026.1 Candidatus Methylobacter oryzae strain KRF1 scaffold33, whole genome shotgun sequence 119,457
NZ_RYFG02000027.1 Candidatus Methylobacter oryzae strain KRF1 C707, whole genome shotgun sequence 1,157
NZ_RYFG02000028.1 Candidatus Methylobacter oryzae strain KRF1 C709, whole genome shotgun sequence 1,192
NZ_RYFG02000029.1 Candidatus Methylobacter oryzae strain KRF1 C711, whole genome shotgun sequence 1,228
NZ_RYFG02000030.1 Candidatus Methylobacter oryzae strain KRF1 C713, whole genome shotgun sequence 1,242
NZ_RYFG02000031.1 Candidatus Methylobacter oryzae strain KRF1 C715, whole genome shotgun sequence 1,249
NZ_RYFG02000032.1 Candidatus Methylobacter oryzae strain KRF1 C717, whole genome shotgun sequence 1,249
NZ_RYFG02000033.1 Candidatus Methylobacter oryzae strain KRF1 C721, whole genome shotgun sequence 1,513
NZ_RYFG02000034.1 Candidatus Methylobacter oryzae strain KRF1 C723, whole genome shotgun sequence 1,548
NZ_RYFG02000035.1 Candidatus Methylobacter oryzae strain KRF1 C725, whole genome shotgun sequence 1,640
NZ_RYFG02000036.1 Candidatus Methylobacter oryzae strain KRF1 C727, whole genome shotgun sequence 1,653
NZ_RYFG02000037.1 Candidatus Methylobacter oryzae strain KRF1 C729, whole genome shotgun sequence 1,775
NZ_RYFG02000038.1 Candidatus Methylobacter oryzae strain KRF1 C731, whole genome shotgun sequence 1,871
NZ_RYFG02000039.1 Candidatus Methylobacter oryzae strain KRF1 C737, whole genome shotgun sequence 2,399
NZ_RYFG02000040.1 Candidatus Methylobacter oryzae strain KRF1 C741, whole genome shotgun sequence 2,744
NZ_RYFG02000041.1 Candidatus Methylobacter oryzae strain KRF1 C743, whole genome shotgun sequence 2,812
NZ_RYFG02000042.1 Candidatus Methylobacter oryzae strain KRF1 C747, whole genome shotgun sequence 2,973
NZ_RYFG02000043.1 Candidatus Methylobacter oryzae strain KRF1 C749, whole genome shotgun sequence 3,101
NZ_RYFG02000044.1 Candidatus Methylobacter oryzae strain KRF1 C751, whole genome shotgun sequence 3,303
NZ_RYFG02000045.1 Candidatus Methylobacter oryzae strain KRF1 C753, whole genome shotgun sequence 4,435
NZ_RYFG02000046.1 Candidatus Methylobacter oryzae strain KRF1 C761, whole genome shotgun sequence 4,667
NZ_RYFG02000047.1 Candidatus Methylobacter oryzae strain KRF1 C763, whole genome shotgun sequence 4,762
NZ_RYFG02000048.1 Candidatus Methylobacter oryzae strain KRF1 C765, whole genome shotgun sequence 5,026
NZ_RYFG02000049.1 Candidatus Methylobacter oryzae strain KRF1 C767, whole genome shotgun sequence 5,078
NZ_RYFG02000050.1 Candidatus Methylobacter oryzae strain KRF1 C769, whole genome shotgun sequence 5,298
NZ_RYFG02000051.1 Candidatus Methylobacter oryzae strain KRF1 C771, whole genome shotgun sequence 5,506
NZ_RYFG02000052.1 Candidatus Methylobacter oryzae strain KRF1 C773, whole genome shotgun sequence 5,521
NZ_RYFG02000053.1 Candidatus Methylobacter oryzae strain KRF1 C775, whole genome shotgun sequence 5,794
NZ_RYFG02000054.1 Candidatus Methylobacter oryzae strain KRF1 C777, whole genome shotgun sequence 5,842
NZ_RYFG02000055.1 Candidatus Methylobacter oryzae strain KRF1 C783, whole genome shotgun sequence 6,500
NZ_RYFG02000056.1 Candidatus Methylobacter oryzae strain KRF1 C787, whole genome shotgun sequence 6,711
NZ_RYFG02000057.1 Candidatus Methylobacter oryzae strain KRF1 C789, whole genome shotgun sequence 7,226
NZ_RYFG02000058.1 Candidatus Methylobacter oryzae strain KRF1 C793, whole genome shotgun sequence 7,983
NZ_RYFG02000059.1 Candidatus Methylobacter oryzae strain KRF1 C797, whole genome shotgun sequence 8,609
NZ_RYFG02000060.1 Candidatus Methylobacter oryzae strain KRF1 C799, whole genome shotgun sequence 8,809
NZ_RYFG02000061.1 Candidatus Methylobacter oryzae strain KRF1 C801, whole genome shotgun sequence 8,841
NZ_RYFG02000062.1 Candidatus Methylobacter oryzae strain KRF1 C803, whole genome shotgun sequence 9,582
NZ_RYFG02000063.1 Candidatus Methylobacter oryzae strain KRF1 C805, whole genome shotgun sequence 10,689
NZ_RYFG02000064.1 Candidatus Methylobacter oryzae strain KRF1 C807, whole genome shotgun sequence 10,841
NZ_RYFG02000065.1 Candidatus Methylobacter oryzae strain KRF1 C811, whole genome shotgun sequence 11,461
NZ_RYFG02000066.1 Candidatus Methylobacter oryzae strain KRF1 C819, whole genome shotgun sequence 13,097
NZ_RYFG02000067.1 Candidatus Methylobacter oryzae strain KRF1 C821, whole genome shotgun sequence 13,140
NZ_RYFG02000068.1 Candidatus Methylobacter oryzae strain KRF1 C827, whole genome shotgun sequence 16,786
NZ_RYFG02000069.1 Candidatus Methylobacter oryzae strain KRF1 C831, whole genome shotgun sequence 17,125
NZ_RYFG02000070.1 Candidatus Methylobacter oryzae strain KRF1 C833, whole genome shotgun sequence 17,334
NZ_RYFG02000071.1 Candidatus Methylobacter oryzae strain KRF1 C835, whole genome shotgun sequence 17,785
NZ_RYFG02000072.1 Candidatus Methylobacter oryzae strain KRF1 C841, whole genome shotgun sequence 19,805
NZ_RYFG02000073.1 Candidatus Methylobacter oryzae strain KRF1 C843, whole genome shotgun sequence 20,841
NZ_RYFG02000074.1 Candidatus Methylobacter oryzae strain KRF1 C845, whole genome shotgun sequence 21,676
NZ_RYFG02000075.1 Candidatus Methylobacter oryzae strain KRF1 C855, whole genome shotgun sequence 25,101
NZ_RYFG02000076.1 Candidatus Methylobacter oryzae strain KRF1 C863, whole genome shotgun sequence 29,071
NZ_RYFG02000077.1 Candidatus Methylobacter oryzae strain KRF1 C865, whole genome shotgun sequence 29,187
NZ_RYFG02000078.1 Candidatus Methylobacter oryzae strain KRF1 C869, whole genome shotgun sequence 29,355
NZ_RYFG02000079.1 Candidatus Methylobacter oryzae strain KRF1 C871, whole genome shotgun sequence 29,442
NZ_RYFG02000080.1 Candidatus Methylobacter oryzae strain KRF1 C873, whole genome shotgun sequence 29,661
NZ_RYFG02000081.1 Candidatus Methylobacter oryzae strain KRF1 C875, whole genome shotgun sequence 29,798
NZ_RYFG02000082.1 Candidatus Methylobacter oryzae strain KRF1 C877, whole genome shotgun sequence 31,931
NZ_RYFG02000083.1 Candidatus Methylobacter oryzae strain KRF1 C879, whole genome shotgun sequence 33,960
NZ_RYFG02000084.1 Candidatus Methylobacter oryzae strain KRF1 C883, whole genome shotgun sequence 34,206
NZ_RYFG02000085.1 Candidatus Methylobacter oryzae strain KRF1 C885, whole genome shotgun sequence 35,806
NZ_RYFG02000086.1 Candidatus Methylobacter oryzae strain KRF1 C889, whole genome shotgun sequence 37,157
NZ_RYFG02000087.1 Candidatus Methylobacter oryzae strain KRF1 C891, whole genome shotgun sequence 37,962
NZ_RYFG02000088.1 Candidatus Methylobacter oryzae strain KRF1 C893, whole genome shotgun sequence 38,592
NZ_RYFG02000089.1 Candidatus Methylobacter oryzae strain KRF1 C895, whole genome shotgun sequence 41,496
NZ_RYFG02000090.1 Candidatus Methylobacter oryzae strain KRF1 C897, whole genome shotgun sequence 42,001
NZ_RYFG02000091.1 Candidatus Methylobacter oryzae strain KRF1 C899, whole genome shotgun sequence 42,115
NZ_RYFG02000092.1 Candidatus Methylobacter oryzae strain KRF1 C905, whole genome shotgun sequence 47,747
NZ_RYFG02000093.1 Candidatus Methylobacter oryzae strain KRF1 C907, whole genome shotgun sequence 47,938
NZ_RYFG02000094.1 Candidatus Methylobacter oryzae strain KRF1 C911, whole genome shotgun sequence 50,784
NZ_RYFG02000095.1 Candidatus Methylobacter oryzae strain KRF1 C913, whole genome shotgun sequence 51,835
NZ_RYFG02000096.1 Candidatus Methylobacter oryzae strain KRF1 C917, whole genome shotgun sequence 55,050
NZ_RYFG02000097.1 Candidatus Methylobacter oryzae strain KRF1 C919, whole genome shotgun sequence 56,559
NZ_RYFG02000098.1 Candidatus Methylobacter oryzae strain KRF1 C921, whole genome shotgun sequence 58,028
NZ_RYFG02000099.1 Candidatus Methylobacter oryzae strain KRF1 C923, whole genome shotgun sequence 58,965
NZ_RYFG02000100.1 Candidatus Methylobacter oryzae strain KRF1 C925, whole genome shotgun sequence 65,415
NZ_RYFG02000101.1 Candidatus Methylobacter oryzae strain KRF1 C927, whole genome shotgun sequence 65,459
NZ_RYFG02000102.1 Candidatus Methylobacter oryzae strain KRF1 C929, whole genome shotgun sequence 66,147
NZ_RYFG02000103.1 Candidatus Methylobacter oryzae strain KRF1 C931, whole genome shotgun sequence 66,475
NZ_RYFG02000104.1 Candidatus Methylobacter oryzae strain KRF1 C935, whole genome shotgun sequence 71,492
NZ_RYFG02000105.1 Candidatus Methylobacter oryzae strain KRF1 C937, whole genome shotgun sequence 78,973
NZ_RYFG02000106.1 Candidatus Methylobacter oryzae strain KRF1 C939, whole genome shotgun sequence 80,063
NZ_RYFG02000107.1 Candidatus Methylobacter oryzae strain KRF1 C941, whole genome shotgun sequence 80,777
NZ_RYFG02000108.1 Candidatus Methylobacter oryzae strain KRF1 C943, whole genome shotgun sequence 83,351
NZ_RYFG02000109.1 Candidatus Methylobacter oryzae strain KRF1 C945, whole genome shotgun sequence 84,133
NZ_RYFG02000110.1 Candidatus Methylobacter oryzae strain KRF1 C947, whole genome shotgun sequence 84,193
NZ_RYFG02000111.1 Candidatus Methylobacter oryzae strain KRF1 C949, whole genome shotgun sequence 85,232
NZ_RYFG02000112.1 Candidatus Methylobacter oryzae strain KRF1 C951, whole genome shotgun sequence 85,413
NZ_RYFG02000113.1 Candidatus Methylobacter oryzae strain KRF1 C955, whole genome shotgun sequence 89,165
NZ_RYFG02000114.1 Candidatus Methylobacter oryzae strain KRF1 C957, whole genome shotgun sequence 99,591
NZ_RYFG02000115.1 Candidatus Methylobacter oryzae strain KRF1 C961, whole genome shotgun sequence 103,408
NZ_RYFG02000116.1 Candidatus Methylobacter oryzae strain KRF1 C963, whole genome shotgun sequence 106,919
NZ_RYFG02000117.1 Candidatus Methylobacter oryzae strain KRF1 C965, whole genome shotgun sequence 117,444
NZ_RYFG02000118.1 Candidatus Methylobacter oryzae strain KRF1 C967, whole genome shotgun sequence 120,508
NZ_RYFG02000119.1 Candidatus Methylobacter oryzae strain KRF1 C973, whole genome shotgun sequence 141,032
NZ_RYFG02000120.1 Candidatus Methylobacter oryzae strain KRF1 C977, whole genome shotgun sequence 219,563
NZ_RYFG02000121.1 Candidatus Methylobacter oryzae strain KRF1 C979, whole genome shotgun sequence 336,074

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory