fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arsenicitalea aurantiaca 42-50

Genome identifier: GCF_003994485.1

NCBI assembly name: ASM399448v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Devosiaceae, Arsenicitalea, Arsenicitalea aurantiaca

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Devosiaceae, Arsenicitalea, Arsenicitalea aurantiaca

Scaffolds: 22

Genes: 3,598 Protein-coding: 3,497 RNAs: 64 pseudogenes: 37

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RZNJ01000001.1 Arsenicitalea aurantiaca strain 42-50 scaffold1, whole genome shotgun sequence 888,513
NZ_RZNJ01000002.1 Arsenicitalea aurantiaca strain 42-50 scaffold2, whole genome shotgun sequence 855,993
NZ_RZNJ01000003.1 Arsenicitalea aurantiaca strain 42-50 scaffold3, whole genome shotgun sequence 573,327
NZ_RZNJ01000004.1 Arsenicitalea aurantiaca strain 42-50 scaffold4, whole genome shotgun sequence 561,067
NZ_RZNJ01000005.1 Arsenicitalea aurantiaca strain 42-50 scaffold5, whole genome shotgun sequence 270,993
NZ_RZNJ01000006.1 Arsenicitalea aurantiaca strain 42-50 scaffold6, whole genome shotgun sequence 164,106
NZ_RZNJ01000007.1 Arsenicitalea aurantiaca strain 42-50 scaffold7, whole genome shotgun sequence 150,849
NZ_RZNJ01000008.1 Arsenicitalea aurantiaca strain 42-50 scaffold8, whole genome shotgun sequence 142,201
NZ_RZNJ01000009.1 Arsenicitalea aurantiaca strain 42-50 scaffold9, whole genome shotgun sequence 63,377
NZ_RZNJ01000010.1 Arsenicitalea aurantiaca strain 42-50 scaffold10, whole genome shotgun sequence 8,241
NZ_RZNJ01000011.1 Arsenicitalea aurantiaca strain 42-50 scaffold11, whole genome shotgun sequence 1,729
NZ_RZNJ01000012.1 Arsenicitalea aurantiaca strain 42-50 scaffold12, whole genome shotgun sequence 1,300
NZ_RZNJ01000013.1 Arsenicitalea aurantiaca strain 42-50 scaffold13, whole genome shotgun sequence 895
NZ_RZNJ01000014.1 Arsenicitalea aurantiaca strain 42-50 scaffold14, whole genome shotgun sequence 764
NZ_RZNJ01000015.1 Arsenicitalea aurantiaca strain 42-50 scaffold15, whole genome shotgun sequence 699
NZ_RZNJ01000016.1 Arsenicitalea aurantiaca strain 42-50 scaffold16, whole genome shotgun sequence 635
NZ_RZNJ01000017.1 Arsenicitalea aurantiaca strain 42-50 scaffold17, whole genome shotgun sequence 425
NZ_RZNJ01000018.1 Arsenicitalea aurantiaca strain 42-50 scaffold18, whole genome shotgun sequence 368
NZ_RZNJ01000019.1 Arsenicitalea aurantiaca strain 42-50 scaffold19, whole genome shotgun sequence 368
NZ_RZNJ01000020.1 Arsenicitalea aurantiaca strain 42-50 scaffold20, whole genome shotgun sequence 332
NZ_RZNJ01000021.1 Arsenicitalea aurantiaca strain 42-50 scaffold21, whole genome shotgun sequence 332
NZ_RZNJ01000022.1 Arsenicitalea aurantiaca strain 42-50 scaffold22, whole genome shotgun sequence 261

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory