fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alexandriicola marinus LZ-14

Genome identifier: GCF_004000435.1

NCBI assembly name: ASM400043v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Alexandriicola, Alexandriicola marinus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Alexandriicola, Alexandriicola marinus

Scaffolds: 111

Genes: 4,610 Protein-coding: 4,476 RNAs: 46 pseudogenes: 88

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_RBVZ01000001.1 Alexandriicola marinus strain LZ-14 Scaffold1, whole genome shotgun sequence 1,319,033
NZ_RBVZ01000002.1 Alexandriicola marinus strain LZ-14 Scaffold2, whole genome shotgun sequence 1,271,123
NZ_RBVZ01000003.1 Alexandriicola marinus strain LZ-14 Scaffold3, whole genome shotgun sequence 322,888
NZ_RBVZ01000004.1 Alexandriicola marinus strain LZ-14 Scaffold4, whole genome shotgun sequence 228,436
NZ_RBVZ01000005.1 Alexandriicola marinus strain LZ-14 Scaffold5, whole genome shotgun sequence 195,736
NZ_RBVZ01000006.1 Alexandriicola marinus strain LZ-14 Scaffold6, whole genome shotgun sequence 169,917
NZ_RBVZ01000007.1 Alexandriicola marinus strain LZ-14 Scaffold7, whole genome shotgun sequence 119,980
NZ_RBVZ01000008.1 Alexandriicola marinus strain LZ-14 Scaffold8, whole genome shotgun sequence 117,908
NZ_RBVZ01000009.1 Alexandriicola marinus strain LZ-14 Scaffold9, whole genome shotgun sequence 95,856
NZ_RBVZ01000010.1 Alexandriicola marinus strain LZ-14 Scaffold10, whole genome shotgun sequence 87,121
NZ_RBVZ01000011.1 Alexandriicola marinus strain LZ-14 Scaffold11, whole genome shotgun sequence 83,235
NZ_RBVZ01000012.1 Alexandriicola marinus strain LZ-14 Scaffold12, whole genome shotgun sequence 67,159
NZ_RBVZ01000013.1 Alexandriicola marinus strain LZ-14 Scaffold13, whole genome shotgun sequence 44,969
NZ_RBVZ01000014.1 Alexandriicola marinus strain LZ-14 Scaffold14, whole genome shotgun sequence 42,444
NZ_RBVZ01000015.1 Alexandriicola marinus strain LZ-14 Scaffold15, whole genome shotgun sequence 40,450
NZ_RBVZ01000016.1 Alexandriicola marinus strain LZ-14 Scaffold16, whole genome shotgun sequence 33,056
NZ_RBVZ01000017.1 Alexandriicola marinus strain LZ-14 Scaffold17, whole genome shotgun sequence 30,104
NZ_RBVZ01000018.1 Alexandriicola marinus strain LZ-14 Scaffold18, whole genome shotgun sequence 27,136
NZ_RBVZ01000019.1 Alexandriicola marinus strain LZ-14 Scaffold19, whole genome shotgun sequence 26,730
NZ_RBVZ01000020.1 Alexandriicola marinus strain LZ-14 Scaffold20, whole genome shotgun sequence 22,882
NZ_RBVZ01000021.1 Alexandriicola marinus strain LZ-14 Scaffold21, whole genome shotgun sequence 21,358
NZ_RBVZ01000022.1 Alexandriicola marinus strain LZ-14 Scaffold22, whole genome shotgun sequence 18,506
NZ_RBVZ01000023.1 Alexandriicola marinus strain LZ-14 Scaffold23, whole genome shotgun sequence 17,899
NZ_RBVZ01000024.1 Alexandriicola marinus strain LZ-14 Scaffold24, whole genome shotgun sequence 16,553
NZ_RBVZ01000025.1 Alexandriicola marinus strain LZ-14 Scaffold25, whole genome shotgun sequence 16,251
NZ_RBVZ01000026.1 Alexandriicola marinus strain LZ-14 Scaffold26, whole genome shotgun sequence 14,161
NZ_RBVZ01000027.1 Alexandriicola marinus strain LZ-14 Scaffold27, whole genome shotgun sequence 12,643
NZ_RBVZ01000028.1 Alexandriicola marinus strain LZ-14 Scaffold28, whole genome shotgun sequence 10,788
NZ_RBVZ01000029.1 Alexandriicola marinus strain LZ-14 Scaffold29, whole genome shotgun sequence 9,317
NZ_RBVZ01000030.1 Alexandriicola marinus strain LZ-14 Scaffold30, whole genome shotgun sequence 8,188
NZ_RBVZ01000031.1 Alexandriicola marinus strain LZ-14 Scaffold31, whole genome shotgun sequence 7,824
NZ_RBVZ01000032.1 Alexandriicola marinus strain LZ-14 Scaffold32, whole genome shotgun sequence 7,466
NZ_RBVZ01000033.1 Alexandriicola marinus strain LZ-14 Scaffold33, whole genome shotgun sequence 7,176
NZ_RBVZ01000034.1 Alexandriicola marinus strain LZ-14 Scaffold34, whole genome shotgun sequence 7,008
NZ_RBVZ01000035.1 Alexandriicola marinus strain LZ-14 Scaffold35, whole genome shotgun sequence 6,625
NZ_RBVZ01000036.1 Alexandriicola marinus strain LZ-14 Scaffold36, whole genome shotgun sequence 6,504
NZ_RBVZ01000037.1 Alexandriicola marinus strain LZ-14 Scaffold37, whole genome shotgun sequence 6,503
NZ_RBVZ01000038.1 Alexandriicola marinus strain LZ-14 Scaffold38, whole genome shotgun sequence 6,340
NZ_RBVZ01000039.1 Alexandriicola marinus strain LZ-14 Scaffold39, whole genome shotgun sequence 5,979
NZ_RBVZ01000040.1 Alexandriicola marinus strain LZ-14 Scaffold40, whole genome shotgun sequence 5,876
NZ_RBVZ01000041.1 Alexandriicola marinus strain LZ-14 Scaffold41, whole genome shotgun sequence 5,705
NZ_RBVZ01000042.1 Alexandriicola marinus strain LZ-14 Scaffold42, whole genome shotgun sequence 3,312
NZ_RBVZ01000043.1 Alexandriicola marinus strain LZ-14 Scaffold43, whole genome shotgun sequence 2,944
NZ_RBVZ01000044.1 Alexandriicola marinus strain LZ-14 Scaffold44, whole genome shotgun sequence 2,551
NZ_RBVZ01000045.1 Alexandriicola marinus strain LZ-14 Scaffold45, whole genome shotgun sequence 2,295
NZ_RBVZ01000046.1 Alexandriicola marinus strain LZ-14 Scaffold46, whole genome shotgun sequence 2,241
NZ_RBVZ01000047.1 Alexandriicola marinus strain LZ-14 Scaffold47, whole genome shotgun sequence 2,179
NZ_RBVZ01000048.1 Alexandriicola marinus strain LZ-14 Scaffold48, whole genome shotgun sequence 2,117
NZ_RBVZ01000049.1 Alexandriicola marinus strain LZ-14 Scaffold49, whole genome shotgun sequence 1,895
NZ_RBVZ01000050.1 Alexandriicola marinus strain LZ-14 Scaffold50, whole genome shotgun sequence 1,861
NZ_RBVZ01000051.1 Alexandriicola marinus strain LZ-14 Scaffold51, whole genome shotgun sequence 1,811
NZ_RBVZ01000052.1 Alexandriicola marinus strain LZ-14 Scaffold52, whole genome shotgun sequence 1,643
NZ_RBVZ01000053.1 Alexandriicola marinus strain LZ-14 Scaffold53, whole genome shotgun sequence 1,519
NZ_RBVZ01000054.1 Alexandriicola marinus strain LZ-14 Scaffold54, whole genome shotgun sequence 1,264
NZ_RBVZ01000055.1 Alexandriicola marinus strain LZ-14 Scaffold55, whole genome shotgun sequence 1,163
NZ_RBVZ01000056.1 Alexandriicola marinus strain LZ-14 Scaffold56, whole genome shotgun sequence 1,051
NZ_RBVZ01000057.1 Alexandriicola marinus strain LZ-14 Scaffold57, whole genome shotgun sequence 1,049
NZ_RBVZ01000058.1 Alexandriicola marinus strain LZ-14 Scaffold58, whole genome shotgun sequence 815
NZ_RBVZ01000059.1 Alexandriicola marinus strain LZ-14 Scaffold59, whole genome shotgun sequence 716
NZ_RBVZ01000060.1 Alexandriicola marinus strain LZ-14 Scaffold60, whole genome shotgun sequence 668
NZ_RBVZ01000061.1 Alexandriicola marinus strain LZ-14 Scaffold61, whole genome shotgun sequence 664
NZ_RBVZ01000062.1 Alexandriicola marinus strain LZ-14 Scaffold62, whole genome shotgun sequence 598
NZ_RBVZ01000063.1 Alexandriicola marinus strain LZ-14 Scaffold63, whole genome shotgun sequence 595
NZ_RBVZ01000064.1 Alexandriicola marinus strain LZ-14 Scaffold64, whole genome shotgun sequence 549
NZ_RBVZ01000065.1 Alexandriicola marinus strain LZ-14 Scaffold65, whole genome shotgun sequence 533
NZ_RBVZ01000066.1 Alexandriicola marinus strain LZ-14 Scaffold66, whole genome shotgun sequence 495
NZ_RBVZ01000067.1 Alexandriicola marinus strain LZ-14 Scaffold67, whole genome shotgun sequence 493
NZ_RBVZ01000068.1 Alexandriicola marinus strain LZ-14 Scaffold68, whole genome shotgun sequence 471
NZ_RBVZ01000069.1 Alexandriicola marinus strain LZ-14 Scaffold69, whole genome shotgun sequence 455
NZ_RBVZ01000070.1 Alexandriicola marinus strain LZ-14 Scaffold70, whole genome shotgun sequence 447
NZ_RBVZ01000071.1 Alexandriicola marinus strain LZ-14 Scaffold71, whole genome shotgun sequence 440
NZ_RBVZ01000072.1 Alexandriicola marinus strain LZ-14 Scaffold72, whole genome shotgun sequence 437
NZ_RBVZ01000073.1 Alexandriicola marinus strain LZ-14 Scaffold73, whole genome shotgun sequence 431
NZ_RBVZ01000074.1 Alexandriicola marinus strain LZ-14 Scaffold74, whole genome shotgun sequence 410
NZ_RBVZ01000075.1 Alexandriicola marinus strain LZ-14 Scaffold75, whole genome shotgun sequence 400
NZ_RBVZ01000076.1 Alexandriicola marinus strain LZ-14 Scaffold76, whole genome shotgun sequence 391
NZ_RBVZ01000077.1 Alexandriicola marinus strain LZ-14 Scaffold77, whole genome shotgun sequence 386
NZ_RBVZ01000078.1 Alexandriicola marinus strain LZ-14 Scaffold78, whole genome shotgun sequence 363
NZ_RBVZ01000079.1 Alexandriicola marinus strain LZ-14 Scaffold79, whole genome shotgun sequence 362
NZ_RBVZ01000080.1 Alexandriicola marinus strain LZ-14 Scaffold80, whole genome shotgun sequence 348
NZ_RBVZ01000081.1 Alexandriicola marinus strain LZ-14 Scaffold81, whole genome shotgun sequence 333
NZ_RBVZ01000082.1 Alexandriicola marinus strain LZ-14 Scaffold82, whole genome shotgun sequence 330
NZ_RBVZ01000083.1 Alexandriicola marinus strain LZ-14 Scaffold83, whole genome shotgun sequence 329
NZ_RBVZ01000084.1 Alexandriicola marinus strain LZ-14 Scaffold84, whole genome shotgun sequence 327
NZ_RBVZ01000085.1 Alexandriicola marinus strain LZ-14 Scaffold85, whole genome shotgun sequence 323
NZ_RBVZ01000086.1 Alexandriicola marinus strain LZ-14 Scaffold86, whole genome shotgun sequence 323
NZ_RBVZ01000087.1 Alexandriicola marinus strain LZ-14 Scaffold87, whole genome shotgun sequence 321
NZ_RBVZ01000088.1 Alexandriicola marinus strain LZ-14 Scaffold88, whole genome shotgun sequence 320
NZ_RBVZ01000089.1 Alexandriicola marinus strain LZ-14 Scaffold89, whole genome shotgun sequence 319
NZ_RBVZ01000090.1 Alexandriicola marinus strain LZ-14 Scaffold90, whole genome shotgun sequence 300
NZ_RBVZ01000091.1 Alexandriicola marinus strain LZ-14 Scaffold91, whole genome shotgun sequence 298
NZ_RBVZ01000092.1 Alexandriicola marinus strain LZ-14 Scaffold92, whole genome shotgun sequence 298
NZ_RBVZ01000093.1 Alexandriicola marinus strain LZ-14 Scaffold93, whole genome shotgun sequence 296
NZ_RBVZ01000094.1 Alexandriicola marinus strain LZ-14 Scaffold94, whole genome shotgun sequence 291
NZ_RBVZ01000095.1 Alexandriicola marinus strain LZ-14 Scaffold95, whole genome shotgun sequence 284
NZ_RBVZ01000096.1 Alexandriicola marinus strain LZ-14 Scaffold96, whole genome shotgun sequence 281
NZ_RBVZ01000097.1 Alexandriicola marinus strain LZ-14 Scaffold97, whole genome shotgun sequence 270
NZ_RBVZ01000098.1 Alexandriicola marinus strain LZ-14 Scaffold98, whole genome shotgun sequence 265
NZ_RBVZ01000099.1 Alexandriicola marinus strain LZ-14 Scaffold99, whole genome shotgun sequence 248
NZ_RBVZ01000100.1 Alexandriicola marinus strain LZ-14 Scaffold100, whole genome shotgun sequence 245
NZ_RBVZ01000101.1 Alexandriicola marinus strain LZ-14 Scaffold101, whole genome shotgun sequence 232
NZ_RBVZ01000102.1 Alexandriicola marinus strain LZ-14 Scaffold102, whole genome shotgun sequence 222
NZ_RBVZ01000103.1 Alexandriicola marinus strain LZ-14 Scaffold103, whole genome shotgun sequence 219
NZ_RBVZ01000104.1 Alexandriicola marinus strain LZ-14 Scaffold104, whole genome shotgun sequence 219
NZ_RBVZ01000105.1 Alexandriicola marinus strain LZ-14 Scaffold105, whole genome shotgun sequence 217
NZ_RBVZ01000106.1 Alexandriicola marinus strain LZ-14 Scaffold106, whole genome shotgun sequence 211
NZ_RBVZ01000107.1 Alexandriicola marinus strain LZ-14 Scaffold107, whole genome shotgun sequence 208
NZ_RBVZ01000108.1 Alexandriicola marinus strain LZ-14 Scaffold108, whole genome shotgun sequence 207
NZ_RBVZ01000109.1 Alexandriicola marinus strain LZ-14 Scaffold109, whole genome shotgun sequence 204
NZ_RBVZ01000110.1 Alexandriicola marinus strain LZ-14 Scaffold110, whole genome shotgun sequence 202
NZ_RBVZ01000111.1 Alexandriicola marinus strain LZ-14 Scaffold111, whole genome shotgun sequence 201

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory