fast.genomicscompare 6,575 genera of bacteria & archaea

 

Paenirhodobacter ferrireducens CCTCC AB 2012026

Genome identifier: GCF_004022265.1

NCBI assembly name: ASM402226v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Paenirhodobacter, Paenirhodobacter ferrireducens

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Sinirhodobacter, Sinirhodobacter ferrireducens

Scaffolds: 61

Genes: 4,008 Protein-coding: 3,874 RNAs: 56 pseudogenes: 78

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SAVB01000001.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold1_1, whole genome shotgun sequence 300,985
NZ_SAVB01000002.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold2_1, whole genome shotgun sequence 255,111
NZ_SAVB01000003.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold3_1, whole genome shotgun sequence 219,292
NZ_SAVB01000004.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold4_1, whole genome shotgun sequence 208,115
NZ_SAVB01000005.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold5_1, whole genome shotgun sequence 206,876
NZ_SAVB01000006.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold6_1, whole genome shotgun sequence 200,650
NZ_SAVB01000007.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold7_1, whole genome shotgun sequence 181,949
NZ_SAVB01000008.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold8_1, whole genome shotgun sequence 163,767
NZ_SAVB01000009.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold9_1, whole genome shotgun sequence 158,504
NZ_SAVB01000010.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold10_1, whole genome shotgun sequence 157,186
NZ_SAVB01000011.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold11_1, whole genome shotgun sequence 137,502
NZ_SAVB01000012.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold11_2, whole genome shotgun sequence 12,061
NZ_SAVB01000013.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold12_1, whole genome shotgun sequence 22,111
NZ_SAVB01000014.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold12_2, whole genome shotgun sequence 125,589
NZ_SAVB01000015.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold13_1, whole genome shotgun sequence 138,016
NZ_SAVB01000016.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold14_1, whole genome shotgun sequence 134,850
NZ_SAVB01000017.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold15_1, whole genome shotgun sequence 55,799
NZ_SAVB01000018.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold15_2, whole genome shotgun sequence 74,588
NZ_SAVB01000019.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold16_1, whole genome shotgun sequence 124,696
NZ_SAVB01000020.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold17_1, whole genome shotgun sequence 113,484
NZ_SAVB01000021.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold18_1, whole genome shotgun sequence 105,144
NZ_SAVB01000022.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold19_1, whole genome shotgun sequence 104,824
NZ_SAVB01000023.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold20_1, whole genome shotgun sequence 102,355
NZ_SAVB01000024.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold21_1, whole genome shotgun sequence 98,414
NZ_SAVB01000025.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold22_1, whole genome shotgun sequence 80,460
NZ_SAVB01000026.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold23_1, whole genome shotgun sequence 75,903
NZ_SAVB01000027.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold24_1, whole genome shotgun sequence 72,069
NZ_SAVB01000028.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold25_1, whole genome shotgun sequence 71,054
NZ_SAVB01000029.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold26_1, whole genome shotgun sequence 64,021
NZ_SAVB01000030.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold27_1, whole genome shotgun sequence 48,463
NZ_SAVB01000031.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold28_1, whole genome shotgun sequence 43,338
NZ_SAVB01000032.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold29_1, whole genome shotgun sequence 37,809
NZ_SAVB01000033.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold30_1, whole genome shotgun sequence 33,950
NZ_SAVB01000034.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold31_1, whole genome shotgun sequence 26,941
NZ_SAVB01000035.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold32_1, whole genome shotgun sequence 25,186
NZ_SAVB01000036.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold33_1, whole genome shotgun sequence 6,070
NZ_SAVB01000037.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold33_2, whole genome shotgun sequence 386
NZ_SAVB01000038.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold33_3, whole genome shotgun sequence 11,446
NZ_SAVB01000039.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold34_1, whole genome shotgun sequence 13,585
NZ_SAVB01000040.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold35_1, whole genome shotgun sequence 12,876
NZ_SAVB01000041.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold36_1, whole genome shotgun sequence 6,124
NZ_SAVB01000042.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold37_1, whole genome shotgun sequence 4,443
NZ_SAVB01000043.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold38_1, whole genome shotgun sequence 3,906
NZ_SAVB01000044.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold39_1, whole genome shotgun sequence 3,029
NZ_SAVB01000045.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold40_1, whole genome shotgun sequence 2,635
NZ_SAVB01000046.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold41_1, whole genome shotgun sequence 2,080
NZ_SAVB01000047.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold42_1, whole genome shotgun sequence 2,078
NZ_SAVB01000048.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold43_1, whole genome shotgun sequence 1,609
NZ_SAVB01000049.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold44_1, whole genome shotgun sequence 1,589
NZ_SAVB01000050.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold45_1, whole genome shotgun sequence 1,470
NZ_SAVB01000051.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold46_1, whole genome shotgun sequence 1,455
NZ_SAVB01000052.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold47_1, whole genome shotgun sequence 1,398
NZ_SAVB01000053.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold48_1, whole genome shotgun sequence 1,384
NZ_SAVB01000054.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold49_1, whole genome shotgun sequence 1,363
NZ_SAVB01000055.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold50_1, whole genome shotgun sequence 1,357
NZ_SAVB01000056.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold51_1, whole genome shotgun sequence 1,265
NZ_SAVB01000057.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold52_1, whole genome shotgun sequence 1,094
NZ_SAVB01000058.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold53_1, whole genome shotgun sequence 937
NZ_SAVB01000059.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold54_1, whole genome shotgun sequence 784
NZ_SAVB01000060.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold55_1, whole genome shotgun sequence 741
NZ_SAVB01000061.1 Sinirhodobacter ferrireducens strain CCTCC AB 2012026 Scaffold56_1, whole genome shotgun sequence 615

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory