fast.genomicscompare 6,575 genera of bacteria & archaea

 

Wagnerdoeblera intermedia 119;4

Genome identifier: GCF_004054105.1

NCBI assembly name: ASM405410v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Wagnerdoeblera, Wagnerdoeblera intermedia

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Gemmobacter, Gemmobacter intermedius

Scaffolds: 152

Genes: 4,004 Protein-coding: 3,841 RNAs: 71 pseudogenes: 92

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SBLC01000001.1 Falsigemmobacter intermedius strain 119/4 Scaffold1, whole genome shotgun sequence 236,361
NZ_SBLC01000002.1 Falsigemmobacter intermedius strain 119/4 Scaffold2, whole genome shotgun sequence 232,320
NZ_SBLC01000003.1 Falsigemmobacter intermedius strain 119/4 Scaffold3, whole genome shotgun sequence 220,685
NZ_SBLC01000004.1 Falsigemmobacter intermedius strain 119/4 Scaffold4, whole genome shotgun sequence 212,979
NZ_SBLC01000005.1 Falsigemmobacter intermedius strain 119/4 Scaffold5, whole genome shotgun sequence 188,908
NZ_SBLC01000006.1 Falsigemmobacter intermedius strain 119/4 Scaffold6, whole genome shotgun sequence 185,383
NZ_SBLC01000007.1 Falsigemmobacter intermedius strain 119/4 Scaffold7, whole genome shotgun sequence 168,695
NZ_SBLC01000008.1 Falsigemmobacter intermedius strain 119/4 Scaffold8, whole genome shotgun sequence 164,000
NZ_SBLC01000009.1 Falsigemmobacter intermedius strain 119/4 Scaffold9, whole genome shotgun sequence 152,351
NZ_SBLC01000010.1 Falsigemmobacter intermedius strain 119/4 Scaffold10, whole genome shotgun sequence 138,349
NZ_SBLC01000011.1 Falsigemmobacter intermedius strain 119/4 Scaffold11, whole genome shotgun sequence 130,882
NZ_SBLC01000012.1 Falsigemmobacter intermedius strain 119/4 Scaffold12, whole genome shotgun sequence 115,564
NZ_SBLC01000013.1 Falsigemmobacter intermedius strain 119/4 Scaffold13, whole genome shotgun sequence 114,871
NZ_SBLC01000014.1 Falsigemmobacter intermedius strain 119/4 Scaffold14, whole genome shotgun sequence 114,093
NZ_SBLC01000015.1 Falsigemmobacter intermedius strain 119/4 Scaffold15, whole genome shotgun sequence 87,282
NZ_SBLC01000016.1 Falsigemmobacter intermedius strain 119/4 Scaffold16, whole genome shotgun sequence 86,674
NZ_SBLC01000017.1 Falsigemmobacter intermedius strain 119/4 Scaffold17, whole genome shotgun sequence 71,848
NZ_SBLC01000018.1 Falsigemmobacter intermedius strain 119/4 Scaffold18, whole genome shotgun sequence 64,073
NZ_SBLC01000019.1 Falsigemmobacter intermedius strain 119/4 Scaffold19, whole genome shotgun sequence 63,868
NZ_SBLC01000020.1 Falsigemmobacter intermedius strain 119/4 Scaffold20, whole genome shotgun sequence 60,091
NZ_SBLC01000021.1 Falsigemmobacter intermedius strain 119/4 Scaffold21, whole genome shotgun sequence 45,847
NZ_SBLC01000022.1 Falsigemmobacter intermedius strain 119/4 Scaffold22, whole genome shotgun sequence 44,474
NZ_SBLC01000023.1 Falsigemmobacter intermedius strain 119/4 Scaffold23, whole genome shotgun sequence 42,522
NZ_SBLC01000024.1 Falsigemmobacter intermedius strain 119/4 Scaffold24, whole genome shotgun sequence 41,422
NZ_SBLC01000025.1 Falsigemmobacter intermedius strain 119/4 Scaffold25, whole genome shotgun sequence 39,903
NZ_SBLC01000026.1 Falsigemmobacter intermedius strain 119/4 Scaffold26, whole genome shotgun sequence 39,746
NZ_SBLC01000027.1 Falsigemmobacter intermedius strain 119/4 Scaffold27, whole genome shotgun sequence 37,709
NZ_SBLC01000028.1 Falsigemmobacter intermedius strain 119/4 Scaffold28, whole genome shotgun sequence 36,455
NZ_SBLC01000029.1 Falsigemmobacter intermedius strain 119/4 Scaffold29, whole genome shotgun sequence 34,953
NZ_SBLC01000030.1 Falsigemmobacter intermedius strain 119/4 Scaffold30, whole genome shotgun sequence 30,729
NZ_SBLC01000031.1 Falsigemmobacter intermedius strain 119/4 Scaffold31, whole genome shotgun sequence 26,463
NZ_SBLC01000032.1 Falsigemmobacter intermedius strain 119/4 Scaffold32, whole genome shotgun sequence 25,964
NZ_SBLC01000033.1 Falsigemmobacter intermedius strain 119/4 Scaffold33, whole genome shotgun sequence 25,664
NZ_SBLC01000034.1 Falsigemmobacter intermedius strain 119/4 Scaffold34, whole genome shotgun sequence 25,289
NZ_SBLC01000035.1 Falsigemmobacter intermedius strain 119/4 Scaffold35, whole genome shotgun sequence 24,344
NZ_SBLC01000036.1 Falsigemmobacter intermedius strain 119/4 Scaffold36, whole genome shotgun sequence 22,916
NZ_SBLC01000037.1 Falsigemmobacter intermedius strain 119/4 Scaffold37, whole genome shotgun sequence 22,210
NZ_SBLC01000038.1 Falsigemmobacter intermedius strain 119/4 Scaffold38, whole genome shotgun sequence 21,864
NZ_SBLC01000039.1 Falsigemmobacter intermedius strain 119/4 Scaffold39, whole genome shotgun sequence 21,859
NZ_SBLC01000040.1 Falsigemmobacter intermedius strain 119/4 Scaffold40, whole genome shotgun sequence 21,459
NZ_SBLC01000041.1 Falsigemmobacter intermedius strain 119/4 Scaffold41, whole genome shotgun sequence 19,569
NZ_SBLC01000042.1 Falsigemmobacter intermedius strain 119/4 Scaffold42, whole genome shotgun sequence 19,475
NZ_SBLC01000043.1 Falsigemmobacter intermedius strain 119/4 Scaffold43, whole genome shotgun sequence 18,552
NZ_SBLC01000044.1 Falsigemmobacter intermedius strain 119/4 Scaffold44, whole genome shotgun sequence 18,110
NZ_SBLC01000045.1 Falsigemmobacter intermedius strain 119/4 Scaffold45, whole genome shotgun sequence 17,927
NZ_SBLC01000046.1 Falsigemmobacter intermedius strain 119/4 Scaffold46, whole genome shotgun sequence 17,772
NZ_SBLC01000047.1 Falsigemmobacter intermedius strain 119/4 Scaffold47, whole genome shotgun sequence 16,555
NZ_SBLC01000048.1 Falsigemmobacter intermedius strain 119/4 Scaffold48, whole genome shotgun sequence 16,368
NZ_SBLC01000049.1 Falsigemmobacter intermedius strain 119/4 Scaffold49, whole genome shotgun sequence 16,181
NZ_SBLC01000050.1 Falsigemmobacter intermedius strain 119/4 Scaffold50, whole genome shotgun sequence 15,566
NZ_SBLC01000051.1 Falsigemmobacter intermedius strain 119/4 Scaffold51, whole genome shotgun sequence 14,909
NZ_SBLC01000052.1 Falsigemmobacter intermedius strain 119/4 Scaffold52, whole genome shotgun sequence 14,342
NZ_SBLC01000053.1 Falsigemmobacter intermedius strain 119/4 Scaffold53, whole genome shotgun sequence 13,464
NZ_SBLC01000054.1 Falsigemmobacter intermedius strain 119/4 Scaffold54, whole genome shotgun sequence 12,836
NZ_SBLC01000055.1 Falsigemmobacter intermedius strain 119/4 Scaffold55, whole genome shotgun sequence 12,597
NZ_SBLC01000056.1 Falsigemmobacter intermedius strain 119/4 Scaffold56, whole genome shotgun sequence 11,985
NZ_SBLC01000057.1 Falsigemmobacter intermedius strain 119/4 Scaffold57, whole genome shotgun sequence 11,550
NZ_SBLC01000058.1 Falsigemmobacter intermedius strain 119/4 Scaffold58, whole genome shotgun sequence 11,450
NZ_SBLC01000059.1 Falsigemmobacter intermedius strain 119/4 Scaffold59, whole genome shotgun sequence 10,227
NZ_SBLC01000060.1 Falsigemmobacter intermedius strain 119/4 Scaffold60, whole genome shotgun sequence 9,706
NZ_SBLC01000061.1 Falsigemmobacter intermedius strain 119/4 Scaffold61, whole genome shotgun sequence 9,480
NZ_SBLC01000062.1 Falsigemmobacter intermedius strain 119/4 Scaffold62, whole genome shotgun sequence 9,279
NZ_SBLC01000063.1 Falsigemmobacter intermedius strain 119/4 Scaffold63, whole genome shotgun sequence 9,103
NZ_SBLC01000064.1 Falsigemmobacter intermedius strain 119/4 Scaffold64, whole genome shotgun sequence 8,961
NZ_SBLC01000065.1 Falsigemmobacter intermedius strain 119/4 Scaffold65, whole genome shotgun sequence 8,615
NZ_SBLC01000066.1 Falsigemmobacter intermedius strain 119/4 Scaffold66, whole genome shotgun sequence 8,191
NZ_SBLC01000067.1 Falsigemmobacter intermedius strain 119/4 Scaffold67, whole genome shotgun sequence 8,162
NZ_SBLC01000068.1 Falsigemmobacter intermedius strain 119/4 Scaffold68, whole genome shotgun sequence 7,881
NZ_SBLC01000069.1 Falsigemmobacter intermedius strain 119/4 Scaffold69, whole genome shotgun sequence 7,454
NZ_SBLC01000070.1 Falsigemmobacter intermedius strain 119/4 Scaffold70, whole genome shotgun sequence 7,299
NZ_SBLC01000071.1 Falsigemmobacter intermedius strain 119/4 Scaffold71, whole genome shotgun sequence 7,244
NZ_SBLC01000072.1 Falsigemmobacter intermedius strain 119/4 Scaffold72, whole genome shotgun sequence 5,797
NZ_SBLC01000073.1 Falsigemmobacter intermedius strain 119/4 Scaffold73, whole genome shotgun sequence 5,603
NZ_SBLC01000074.1 Falsigemmobacter intermedius strain 119/4 Scaffold74, whole genome shotgun sequence 5,588
NZ_SBLC01000075.1 Falsigemmobacter intermedius strain 119/4 Scaffold75, whole genome shotgun sequence 5,569
NZ_SBLC01000076.1 Falsigemmobacter intermedius strain 119/4 Scaffold76, whole genome shotgun sequence 5,555
NZ_SBLC01000077.1 Falsigemmobacter intermedius strain 119/4 Scaffold77, whole genome shotgun sequence 5,449
NZ_SBLC01000078.1 Falsigemmobacter intermedius strain 119/4 Scaffold78, whole genome shotgun sequence 5,389
NZ_SBLC01000079.1 Falsigemmobacter intermedius strain 119/4 Scaffold79, whole genome shotgun sequence 5,304
NZ_SBLC01000080.1 Falsigemmobacter intermedius strain 119/4 Scaffold80, whole genome shotgun sequence 5,096
NZ_SBLC01000081.1 Falsigemmobacter intermedius strain 119/4 Scaffold81, whole genome shotgun sequence 5,007
NZ_SBLC01000082.1 Falsigemmobacter intermedius strain 119/4 Scaffold82, whole genome shotgun sequence 4,955
NZ_SBLC01000083.1 Falsigemmobacter intermedius strain 119/4 Scaffold83, whole genome shotgun sequence 4,953
NZ_SBLC01000084.1 Falsigemmobacter intermedius strain 119/4 Scaffold84, whole genome shotgun sequence 4,936
NZ_SBLC01000085.1 Falsigemmobacter intermedius strain 119/4 Scaffold85, whole genome shotgun sequence 4,852
NZ_SBLC01000086.1 Falsigemmobacter intermedius strain 119/4 Scaffold86, whole genome shotgun sequence 4,680
NZ_SBLC01000087.1 Falsigemmobacter intermedius strain 119/4 Scaffold87, whole genome shotgun sequence 4,401
NZ_SBLC01000088.1 Falsigemmobacter intermedius strain 119/4 Scaffold88, whole genome shotgun sequence 4,198
NZ_SBLC01000089.1 Falsigemmobacter intermedius strain 119/4 Scaffold89, whole genome shotgun sequence 4,180
NZ_SBLC01000090.1 Falsigemmobacter intermedius strain 119/4 Scaffold90, whole genome shotgun sequence 4,087
NZ_SBLC01000091.1 Falsigemmobacter intermedius strain 119/4 Scaffold91, whole genome shotgun sequence 4,082
NZ_SBLC01000092.1 Falsigemmobacter intermedius strain 119/4 Scaffold92, whole genome shotgun sequence 3,918
NZ_SBLC01000093.1 Falsigemmobacter intermedius strain 119/4 Scaffold93, whole genome shotgun sequence 3,909
NZ_SBLC01000094.1 Falsigemmobacter intermedius strain 119/4 Scaffold94, whole genome shotgun sequence 3,888
NZ_SBLC01000095.1 Falsigemmobacter intermedius strain 119/4 Scaffold95, whole genome shotgun sequence 3,830
NZ_SBLC01000096.1 Falsigemmobacter intermedius strain 119/4 Scaffold96, whole genome shotgun sequence 3,738
NZ_SBLC01000097.1 Falsigemmobacter intermedius strain 119/4 Scaffold97, whole genome shotgun sequence 3,594
NZ_SBLC01000098.1 Falsigemmobacter intermedius strain 119/4 Scaffold98, whole genome shotgun sequence 3,411
NZ_SBLC01000099.1 Falsigemmobacter intermedius strain 119/4 Scaffold99, whole genome shotgun sequence 3,347
NZ_SBLC01000100.1 Falsigemmobacter intermedius strain 119/4 Scaffold100, whole genome shotgun sequence 3,336
NZ_SBLC01000101.1 Falsigemmobacter intermedius strain 119/4 Scaffold101, whole genome shotgun sequence 2,999
NZ_SBLC01000102.1 Falsigemmobacter intermedius strain 119/4 Scaffold102, whole genome shotgun sequence 2,832
NZ_SBLC01000103.1 Falsigemmobacter intermedius strain 119/4 Scaffold103, whole genome shotgun sequence 2,752
NZ_SBLC01000104.1 Falsigemmobacter intermedius strain 119/4 Scaffold104, whole genome shotgun sequence 2,702
NZ_SBLC01000105.1 Falsigemmobacter intermedius strain 119/4 Scaffold105, whole genome shotgun sequence 2,627
NZ_SBLC01000106.1 Falsigemmobacter intermedius strain 119/4 Scaffold106, whole genome shotgun sequence 2,603
NZ_SBLC01000107.1 Falsigemmobacter intermedius strain 119/4 Scaffold107, whole genome shotgun sequence 2,548
NZ_SBLC01000108.1 Falsigemmobacter intermedius strain 119/4 Scaffold108, whole genome shotgun sequence 2,534
NZ_SBLC01000109.1 Falsigemmobacter intermedius strain 119/4 Scaffold109, whole genome shotgun sequence 2,457
NZ_SBLC01000110.1 Falsigemmobacter intermedius strain 119/4 Scaffold110, whole genome shotgun sequence 2,377
NZ_SBLC01000111.1 Falsigemmobacter intermedius strain 119/4 Scaffold111, whole genome shotgun sequence 2,364
NZ_SBLC01000112.1 Falsigemmobacter intermedius strain 119/4 Scaffold112, whole genome shotgun sequence 2,362
NZ_SBLC01000113.1 Falsigemmobacter intermedius strain 119/4 Scaffold113, whole genome shotgun sequence 2,297
NZ_SBLC01000114.1 Falsigemmobacter intermedius strain 119/4 Scaffold114, whole genome shotgun sequence 2,290
NZ_SBLC01000115.1 Falsigemmobacter intermedius strain 119/4 Scaffold115, whole genome shotgun sequence 2,225
NZ_SBLC01000116.1 Falsigemmobacter intermedius strain 119/4 Scaffold116, whole genome shotgun sequence 2,223
NZ_SBLC01000117.1 Falsigemmobacter intermedius strain 119/4 Scaffold117, whole genome shotgun sequence 2,140
NZ_SBLC01000118.1 Falsigemmobacter intermedius strain 119/4 Scaffold118, whole genome shotgun sequence 2,134
NZ_SBLC01000119.1 Falsigemmobacter intermedius strain 119/4 Scaffold119, whole genome shotgun sequence 2,125
NZ_SBLC01000120.1 Falsigemmobacter intermedius strain 119/4 Scaffold120, whole genome shotgun sequence 2,124
NZ_SBLC01000121.1 Falsigemmobacter intermedius strain 119/4 Scaffold121, whole genome shotgun sequence 2,103
NZ_SBLC01000122.1 Falsigemmobacter intermedius strain 119/4 Scaffold122, whole genome shotgun sequence 2,059
NZ_SBLC01000123.1 Falsigemmobacter intermedius strain 119/4 Scaffold123, whole genome shotgun sequence 2,004
NZ_SBLC01000124.1 Falsigemmobacter intermedius strain 119/4 Scaffold124, whole genome shotgun sequence 1,866
NZ_SBLC01000125.1 Falsigemmobacter intermedius strain 119/4 Scaffold125, whole genome shotgun sequence 1,768
NZ_SBLC01000126.1 Falsigemmobacter intermedius strain 119/4 Scaffold126, whole genome shotgun sequence 1,750
NZ_SBLC01000127.1 Falsigemmobacter intermedius strain 119/4 Scaffold127, whole genome shotgun sequence 1,689
NZ_SBLC01000128.1 Falsigemmobacter intermedius strain 119/4 Scaffold128, whole genome shotgun sequence 1,663
NZ_SBLC01000129.1 Falsigemmobacter intermedius strain 119/4 Scaffold129, whole genome shotgun sequence 1,635
NZ_SBLC01000130.1 Falsigemmobacter intermedius strain 119/4 Scaffold130, whole genome shotgun sequence 1,631
NZ_SBLC01000131.1 Falsigemmobacter intermedius strain 119/4 Scaffold131, whole genome shotgun sequence 1,573
NZ_SBLC01000132.1 Falsigemmobacter intermedius strain 119/4 Scaffold132, whole genome shotgun sequence 1,552
NZ_SBLC01000133.1 Falsigemmobacter intermedius strain 119/4 Scaffold133, whole genome shotgun sequence 1,488
NZ_SBLC01000134.1 Falsigemmobacter intermedius strain 119/4 Scaffold134, whole genome shotgun sequence 1,479
NZ_SBLC01000135.1 Falsigemmobacter intermedius strain 119/4 Scaffold135, whole genome shotgun sequence 1,454
NZ_SBLC01000136.1 Falsigemmobacter intermedius strain 119/4 Scaffold136, whole genome shotgun sequence 1,441
NZ_SBLC01000137.1 Falsigemmobacter intermedius strain 119/4 Scaffold137, whole genome shotgun sequence 1,413
NZ_SBLC01000138.1 Falsigemmobacter intermedius strain 119/4 Scaffold138, whole genome shotgun sequence 1,408
NZ_SBLC01000139.1 Falsigemmobacter intermedius strain 119/4 Scaffold139, whole genome shotgun sequence 1,342
NZ_SBLC01000140.1 Falsigemmobacter intermedius strain 119/4 Scaffold140, whole genome shotgun sequence 1,334
NZ_SBLC01000141.1 Falsigemmobacter intermedius strain 119/4 Scaffold141, whole genome shotgun sequence 1,299
NZ_SBLC01000142.1 Falsigemmobacter intermedius strain 119/4 Scaffold142, whole genome shotgun sequence 1,252
NZ_SBLC01000143.1 Falsigemmobacter intermedius strain 119/4 Scaffold143, whole genome shotgun sequence 1,243
NZ_SBLC01000144.1 Falsigemmobacter intermedius strain 119/4 Scaffold144, whole genome shotgun sequence 1,211
NZ_SBLC01000145.1 Falsigemmobacter intermedius strain 119/4 Scaffold146, whole genome shotgun sequence 1,191
NZ_SBLC01000146.1 Falsigemmobacter intermedius strain 119/4 Scaffold147, whole genome shotgun sequence 1,151
NZ_SBLC01000147.1 Falsigemmobacter intermedius strain 119/4 Scaffold148, whole genome shotgun sequence 1,144
NZ_SBLC01000148.1 Falsigemmobacter intermedius strain 119/4 Scaffold149, whole genome shotgun sequence 1,133
NZ_SBLC01000149.1 Falsigemmobacter intermedius strain 119/4 Scaffold150, whole genome shotgun sequence 1,101
NZ_SBLC01000150.1 Falsigemmobacter intermedius strain 119/4 Scaffold151, whole genome shotgun sequence 1,068
NZ_SBLC01000151.1 Falsigemmobacter intermedius strain 119/4 Scaffold152, whole genome shotgun sequence 1,063
NZ_SBLC01000152.1 Falsigemmobacter intermedius strain 119/4 Scaffold153, whole genome shotgun sequence 1,021

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory