fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methanoculleus_A taiwanensis CYW4

Genome identifier: GCF_004102725.1

NCBI assembly name: ASM410272v1

GTDB taxonomy: Archaea, Halobacteriota, Methanomicrobia, Methanomicrobiales, Methanoculleaceae, Methanoculleus_A, Methanoculleus_A taiwanensis

NCBI taxonomy: Archaea, Euryarchaeota, Methanomicrobia, Methanomicrobiales, Methanomicrobiaceae, Methanoculleus, Methanoculleus taiwanensis

Scaffolds: 12

Genes: 2,735 Protein-coding: 2,672 RNAs: 57 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LHQS01000001.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_1, whole genome shotgun sequence 939,805
NZ_LHQS01000002.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_2, whole genome shotgun sequence 1,210,448
NZ_LHQS01000003.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_3, whole genome shotgun sequence 417,984
NZ_LHQS01000004.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_4, whole genome shotgun sequence 165,205
NZ_LHQS01000005.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_5, whole genome shotgun sequence 2,542
NZ_LHQS01000006.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_6, whole genome shotgun sequence 218
NZ_LHQS01000007.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_7, whole genome shotgun sequence 2,713
NZ_LHQS01000008.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_8, whole genome shotgun sequence 7,186
NZ_LHQS01000009.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_9, whole genome shotgun sequence 1,656
NZ_LHQS01000010.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_10, whole genome shotgun sequence 1,866
NZ_LHQS01000011.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_11, whole genome shotgun sequence 625
NZ_LHQS01000012.1 Methanoculleus taiwanensis strain CYW4 CYW4_contig_12, whole genome shotgun sequence 472

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory