fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nanosyncoccus alces TM7_G3_2_Rum_HOT_351B

Genome identifier: GCF_004138395.1

NCBI assembly name: ASM413839v1

GTDB taxonomy: Bacteria, Patescibacteria, Saccharimonadia, Saccharimonadales, Nanosyncoccaceae, Nanosyncoccus, Nanosyncoccus alces

NCBI taxonomy: Bacteria, Candidatus Saccharibacteria, Candidatus Nanosyncoccalia, Candidatus Nanosyncoccales, Candidatus Nanosyncoccacae, Candidatus Nanosyncoccus, Candidatus Nanosyncoccus alces

Scaffolds: 6

Genes: 764 Protein-coding: 711 RNAs: 52 pseudogenes: 1

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PRLM01000001.1 Candidatus Nanosyncoccus alces strain TM7_G3_2_Rum_HOT_351B G3RUM_1, whole genome shotgun sequence 176,314
NZ_PRLM01000002.1 Candidatus Nanosyncoccus alces strain TM7_G3_2_Rum_HOT_351B G3RUM_2, whole genome shotgun sequence 114,544
NZ_PRLM01000003.1 Candidatus Nanosyncoccus alces strain TM7_G3_2_Rum_HOT_351B G3RUM_3, whole genome shotgun sequence 117,809
NZ_PRLM01000004.1 Candidatus Nanosyncoccus alces strain TM7_G3_2_Rum_HOT_351B G3RUM_4, whole genome shotgun sequence 52,962
NZ_PRLM01000005.1 Candidatus Nanosyncoccus alces strain TM7_G3_2_Rum_HOT_351B G3RUM_5, whole genome shotgun sequence 32,553
NZ_PRLM01000006.1 Candidatus Nanosyncoccus alces strain TM7_G3_2_Rum_HOT_351B G3RUM_6, whole genome shotgun sequence 232,758

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory