fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nanogingivalis gingivitcus TM7_CMJM_G6_1_HOT_870

Genome identifier: GCF_004151455.1

NCBI assembly name: ASM415145v1

GTDB taxonomy: Bacteria, Patescibacteria, Saccharimonadia, Saccharimonadales, Nanogingivalaceae, Nanogingivalis, Nanogingivalis gingivitcus

NCBI taxonomy: Bacteria, Candidatus Saccharibacteria, Candidatus Nanosyncoccalia, Candidatus Nanogingivales, Candidatus Nanogingivalaceae, Candidatus Nanogingivalis, Candidatus Nanogingivalis gingivitcus

Scaffolds: 17

Genes: 642 Protein-coding: 597 RNAs: 43 pseudogenes: 2

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PRLK01000001.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_1, whole genome shotgun sequence 136,145
NZ_PRLK01000002.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_2, whole genome shotgun sequence 85,050
NZ_PRLK01000003.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_3, whole genome shotgun sequence 72,601
NZ_PRLK01000004.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_4, whole genome shotgun sequence 70,435
NZ_PRLK01000005.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_5, whole genome shotgun sequence 57,693
NZ_PRLK01000006.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_6, whole genome shotgun sequence 46,082
NZ_PRLK01000007.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_7, whole genome shotgun sequence 28,520
NZ_PRLK01000008.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_8, whole genome shotgun sequence 25,921
NZ_PRLK01000009.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_9, whole genome shotgun sequence 18,652
NZ_PRLK01000010.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_10, whole genome shotgun sequence 18,274
NZ_PRLK01000011.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_11, whole genome shotgun sequence 13,927
NZ_PRLK01000012.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_12, whole genome shotgun sequence 13,205
NZ_PRLK01000013.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_13, whole genome shotgun sequence 11,114
NZ_PRLK01000014.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_14, whole genome shotgun sequence 10,510
NZ_PRLK01000015.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_15, whole genome shotgun sequence 9,228
NZ_PRLK01000016.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_16, whole genome shotgun sequence 4,608
NZ_PRLK01000017.1 Candidatus Nanogingivalis gingivitcus strain TM7_CMJM_G6_1_HOT_870 G6CMJM_17, whole genome shotgun sequence 3,797

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory