fast.genomicscompare 6,575 genera of bacteria & archaea

 

Frisingicoccus caecimuris DSM 28559

Genome identifier: GCF_004340975.1

NCBI assembly name: ASM434097v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Frisingicoccus, Frisingicoccus caecimuris

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Frisingicoccus, Frisingicoccus caecimuris

Scaffolds: 35

Genes: 2,709 Protein-coding: 2,606 RNAs: 64 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SLXA01000001.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_101, whole genome shotgun sequence 467,712
NZ_SLXA01000002.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_102, whole genome shotgun sequence 353,749
NZ_SLXA01000003.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_103, whole genome shotgun sequence 271,296
NZ_SLXA01000004.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_104, whole genome shotgun sequence 241,448
NZ_SLXA01000005.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_105, whole genome shotgun sequence 177,881
NZ_SLXA01000006.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_106, whole genome shotgun sequence 137,705
NZ_SLXA01000007.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_107, whole genome shotgun sequence 131,579
NZ_SLXA01000008.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_108, whole genome shotgun sequence 105,756
NZ_SLXA01000009.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_109, whole genome shotgun sequence 97,002
NZ_SLXA01000010.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_110, whole genome shotgun sequence 95,126
NZ_SLXA01000011.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_111, whole genome shotgun sequence 91,223
NZ_SLXA01000012.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_112, whole genome shotgun sequence 72,466
NZ_SLXA01000013.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_113, whole genome shotgun sequence 63,008
NZ_SLXA01000014.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_114, whole genome shotgun sequence 58,796
NZ_SLXA01000015.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_115, whole genome shotgun sequence 55,155
NZ_SLXA01000016.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_116, whole genome shotgun sequence 54,934
NZ_SLXA01000017.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_117, whole genome shotgun sequence 40,428
NZ_SLXA01000018.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_118, whole genome shotgun sequence 39,938
NZ_SLXA01000019.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_119, whole genome shotgun sequence 34,711
NZ_SLXA01000020.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_120, whole genome shotgun sequence 31,537
NZ_SLXA01000021.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_121, whole genome shotgun sequence 29,975
NZ_SLXA01000022.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_122, whole genome shotgun sequence 17,673
NZ_SLXA01000023.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_123, whole genome shotgun sequence 14,081
NZ_SLXA01000024.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_124, whole genome shotgun sequence 6,782
NZ_SLXA01000025.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_125, whole genome shotgun sequence 4,868
NZ_SLXA01000026.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_126, whole genome shotgun sequence 4,124
NZ_SLXA01000027.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_127, whole genome shotgun sequence 2,551
NZ_SLXA01000028.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_128, whole genome shotgun sequence 2,460
NZ_SLXA01000029.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_129, whole genome shotgun sequence 2,289
NZ_SLXA01000030.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_130, whole genome shotgun sequence 2,242
NZ_SLXA01000031.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_131, whole genome shotgun sequence 1,901
NZ_SLXA01000032.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_132, whole genome shotgun sequence 1,814
NZ_SLXA01000033.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_133, whole genome shotgun sequence 1,511
NZ_SLXA01000034.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_134, whole genome shotgun sequence 1,392
NZ_SLXA01000035.1 Frisingicoccus caecimuris strain DSM 28559 Ga0310541_135, whole genome shotgun sequence 1,251

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory