fast.genomicscompare 6,575 genera of bacteria & archaea

 

Reinekea marinisedimentorum DSM 15388

Genome identifier: GCF_004341165.1

NCBI assembly name: ASM434116v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Natronospirillaceae, Reinekea, Reinekea marinisedimentorum

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Saccharospirillaceae, Reinekea, Reinekea marinisedimentorum

Scaffolds: 62

Genes: 3,832 Protein-coding: 3,763 RNAs: 55 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SLZR01000001.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_101, whole genome shotgun sequence 481,729
NZ_SLZR01000002.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_102, whole genome shotgun sequence 436,960
NZ_SLZR01000003.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_103, whole genome shotgun sequence 420,780
NZ_SLZR01000004.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_104, whole genome shotgun sequence 245,935
NZ_SLZR01000005.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_105, whole genome shotgun sequence 241,427
NZ_SLZR01000006.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_106, whole genome shotgun sequence 226,361
NZ_SLZR01000007.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_107, whole genome shotgun sequence 211,471
NZ_SLZR01000008.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_108, whole genome shotgun sequence 207,386
NZ_SLZR01000009.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_109, whole genome shotgun sequence 204,538
NZ_SLZR01000010.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_110, whole genome shotgun sequence 165,948
NZ_SLZR01000011.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_111, whole genome shotgun sequence 133,653
NZ_SLZR01000012.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_112, whole genome shotgun sequence 121,843
NZ_SLZR01000013.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_113, whole genome shotgun sequence 107,634
NZ_SLZR01000014.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_114, whole genome shotgun sequence 96,090
NZ_SLZR01000015.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_115, whole genome shotgun sequence 86,935
NZ_SLZR01000016.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_116, whole genome shotgun sequence 79,310
NZ_SLZR01000017.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_117, whole genome shotgun sequence 72,479
NZ_SLZR01000018.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_118, whole genome shotgun sequence 60,143
NZ_SLZR01000019.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_119, whole genome shotgun sequence 59,768
NZ_SLZR01000020.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_120, whole genome shotgun sequence 58,771
NZ_SLZR01000021.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_121, whole genome shotgun sequence 55,179
NZ_SLZR01000022.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_122, whole genome shotgun sequence 51,962
NZ_SLZR01000023.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_123, whole genome shotgun sequence 45,917
NZ_SLZR01000024.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_124, whole genome shotgun sequence 44,963
NZ_SLZR01000025.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_125, whole genome shotgun sequence 40,524
NZ_SLZR01000026.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_126, whole genome shotgun sequence 34,834
NZ_SLZR01000027.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_127, whole genome shotgun sequence 32,537
NZ_SLZR01000028.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_128, whole genome shotgun sequence 30,662
NZ_SLZR01000029.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_129, whole genome shotgun sequence 24,592
NZ_SLZR01000030.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_130, whole genome shotgun sequence 18,912
NZ_SLZR01000031.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_131, whole genome shotgun sequence 13,597
NZ_SLZR01000032.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_132, whole genome shotgun sequence 13,141
NZ_SLZR01000033.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_133, whole genome shotgun sequence 12,263
NZ_SLZR01000034.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_134, whole genome shotgun sequence 10,196
NZ_SLZR01000035.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_135, whole genome shotgun sequence 9,170
NZ_SLZR01000036.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_136, whole genome shotgun sequence 8,730
NZ_SLZR01000037.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_137, whole genome shotgun sequence 8,285
NZ_SLZR01000038.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_138, whole genome shotgun sequence 5,655
NZ_SLZR01000039.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_139, whole genome shotgun sequence 5,390
NZ_SLZR01000040.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_140, whole genome shotgun sequence 4,563
NZ_SLZR01000041.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_141, whole genome shotgun sequence 3,873
NZ_SLZR01000042.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_142, whole genome shotgun sequence 2,963
NZ_SLZR01000043.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_143, whole genome shotgun sequence 2,922
NZ_SLZR01000044.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_144, whole genome shotgun sequence 2,546
NZ_SLZR01000045.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_145, whole genome shotgun sequence 2,412
NZ_SLZR01000046.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_146, whole genome shotgun sequence 2,350
NZ_SLZR01000047.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_147, whole genome shotgun sequence 2,225
NZ_SLZR01000048.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_148, whole genome shotgun sequence 2,098
NZ_SLZR01000049.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_149, whole genome shotgun sequence 2,031
NZ_SLZR01000050.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_150, whole genome shotgun sequence 1,941
NZ_SLZR01000051.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_151, whole genome shotgun sequence 1,932
NZ_SLZR01000052.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_152, whole genome shotgun sequence 1,675
NZ_SLZR01000053.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_153, whole genome shotgun sequence 1,322
NZ_SLZR01000054.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_154, whole genome shotgun sequence 1,281
NZ_SLZR01000055.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_155, whole genome shotgun sequence 1,236
NZ_SLZR01000056.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_156, whole genome shotgun sequence 1,207
NZ_SLZR01000057.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_157, whole genome shotgun sequence 1,178
NZ_SLZR01000058.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_158, whole genome shotgun sequence 1,165
NZ_SLZR01000059.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_159, whole genome shotgun sequence 1,098
NZ_SLZR01000060.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_160, whole genome shotgun sequence 1,053
NZ_SLZR01000061.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_161, whole genome shotgun sequence 1,048
NZ_SLZR01000062.1 Reinekea marinisedimentorum strain DSM 15388 Ga0104519_162, whole genome shotgun sequence 1,047

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory