fast.genomicscompare 6,575 genera of bacteria & archaea

 

Oharaeibacter diazotrophicus DSM 102969

Genome identifier: GCF_004362745.1

NCBI assembly name: ASM436274v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Pleomorphomonadaceae, Oharaeibacter, Oharaeibacter diazotrophicus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Pleomorphomonadaceae, Oharaeibacter, Oharaeibacter diazotrophicus

Scaffolds: 14

Genes: 4,581 Protein-coding: 4,492 RNAs: 57 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SNXY01000001.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_110, whole genome shotgun sequence 21,484
NZ_SNXY01000002.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_111, whole genome shotgun sequence 2,737
NZ_SNXY01000003.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_112, whole genome shotgun sequence 2,331
NZ_SNXY01000004.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_113, whole genome shotgun sequence 1,799
NZ_SNXY01000005.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_114, whole genome shotgun sequence 1,428
NZ_SNXY01000006.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_101, whole genome shotgun sequence 1,824,113
NZ_SNXY01000007.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_102, whole genome shotgun sequence 810,054
NZ_SNXY01000008.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_103, whole genome shotgun sequence 589,633
NZ_SNXY01000009.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_104, whole genome shotgun sequence 583,064
NZ_SNXY01000010.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_105, whole genome shotgun sequence 580,357
NZ_SNXY01000011.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_106, whole genome shotgun sequence 230,511
NZ_SNXY01000012.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_107, whole genome shotgun sequence 154,639
NZ_SNXY01000013.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_108, whole genome shotgun sequence 135,212
NZ_SNXY01000014.1 Oharaeibacter diazotrophicus strain DSM 102969 Ga0244730_109, whole genome shotgun sequence 54,530

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory