fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinomonas communis DSM 5604

Genome identifier: GCF_004363305.1

NCBI assembly name: ASM436330v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Marinomonadaceae, Marinomonas, Marinomonas communis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Oceanospirillaceae, Marinomonas, Marinomonas communis

Scaffolds: 11

Genes: 3,613 Protein-coding: 3,520 RNAs: 84 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SNZA01000001.1 Marinomonas communis strain DSM 5604 Ga0215679_101, whole genome shotgun sequence 1,371,506
NZ_SNZA01000002.1 Marinomonas communis strain DSM 5604 Ga0215679_102, whole genome shotgun sequence 575,095
NZ_SNZA01000003.1 Marinomonas communis strain DSM 5604 Ga0215679_103, whole genome shotgun sequence 537,831
NZ_SNZA01000004.1 Marinomonas communis strain DSM 5604 Ga0215679_104, whole genome shotgun sequence 461,746
NZ_SNZA01000005.1 Marinomonas communis strain DSM 5604 Ga0215679_105, whole genome shotgun sequence 343,469
NZ_SNZA01000006.1 Marinomonas communis strain DSM 5604 Ga0215679_106, whole genome shotgun sequence 286,736
NZ_SNZA01000007.1 Marinomonas communis strain DSM 5604 Ga0215679_107, whole genome shotgun sequence 156,463
NZ_SNZA01000008.1 Marinomonas communis strain DSM 5604 Ga0215679_108, whole genome shotgun sequence 64,159
NZ_SNZA01000009.1 Marinomonas communis strain DSM 5604 Ga0215679_109, whole genome shotgun sequence 49,319
NZ_SNZA01000010.1 Marinomonas communis strain DSM 5604 Ga0215679_110, whole genome shotgun sequence 5,113
NZ_SNZA01000011.1 Marinomonas communis strain DSM 5604 Ga0215679_111, whole genome shotgun sequence 3,026

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory