fast.genomicscompare 6,575 genera of bacteria & archaea

 

Hypnocyclicus thermotrophus DSM 100055

Genome identifier: GCF_004365575.1

NCBI assembly name: ASM436557v1

GTDB taxonomy: Bacteria, Fusobacteriota, Fusobacteriia, Fusobacteriales, Fusobacteriaceae, Hypnocyclicus, Hypnocyclicus thermotrophus

NCBI taxonomy: Bacteria, Fusobacteriota, Fusobacteriia, Fusobacteriales, Fusobacteriaceae, Hypnocyclicus, Hypnocyclicus thermotrophus

Scaffolds: 17

Genes: 2,109 Protein-coding: 2,035 RNAs: 68 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SOBG01000001.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_101, whole genome shotgun sequence 448,681
NZ_SOBG01000002.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_102, whole genome shotgun sequence 341,682
NZ_SOBG01000003.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_103, whole genome shotgun sequence 266,317
NZ_SOBG01000004.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_104, whole genome shotgun sequence 257,765
NZ_SOBG01000005.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_105, whole genome shotgun sequence 209,428
NZ_SOBG01000006.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_106, whole genome shotgun sequence 157,840
NZ_SOBG01000007.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_107, whole genome shotgun sequence 130,538
NZ_SOBG01000008.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_108, whole genome shotgun sequence 126,533
NZ_SOBG01000009.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_109, whole genome shotgun sequence 111,125
NZ_SOBG01000010.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_110, whole genome shotgun sequence 64,085
NZ_SOBG01000011.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_111, whole genome shotgun sequence 47,631
NZ_SOBG01000012.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_112, whole genome shotgun sequence 27,118
NZ_SOBG01000013.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_113, whole genome shotgun sequence 14,086
NZ_SOBG01000014.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_114, whole genome shotgun sequence 6,813
NZ_SOBG01000015.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_115, whole genome shotgun sequence 4,906
NZ_SOBG01000016.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_116, whole genome shotgun sequence 3,180
NZ_SOBG01000017.1 Hypnocyclicus thermotrophus strain DSM 100055 Ga0310544_117, whole genome shotgun sequence 1,203

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory