fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thiohalophilus thiocyanatoxydans DSM 16326

Genome identifier: GCF_004366735.1

NCBI assembly name: ASM436673v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, UBA6429, UBA6429, Thiohalophilus, Thiohalophilus thiocyanatoxydans

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Thioalkalispiraceae, Thiohalophilus, Thiohalophilus thiocyanatoxydans

Scaffolds: 15

Genes: 2,820 Protein-coding: 2,758 RNAs: 46 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SOQX01000001.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_101, whole genome shotgun sequence 764,393
NZ_SOQX01000002.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_102, whole genome shotgun sequence 673,394
NZ_SOQX01000003.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_103, whole genome shotgun sequence 270,506
NZ_SOQX01000004.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_104, whole genome shotgun sequence 261,003
NZ_SOQX01000005.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_105, whole genome shotgun sequence 202,649
NZ_SOQX01000006.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_106, whole genome shotgun sequence 189,205
NZ_SOQX01000007.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_107, whole genome shotgun sequence 155,265
NZ_SOQX01000008.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_108, whole genome shotgun sequence 132,829
NZ_SOQX01000009.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_109, whole genome shotgun sequence 105,221
NZ_SOQX01000010.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_110, whole genome shotgun sequence 72,743
NZ_SOQX01000011.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_111, whole genome shotgun sequence 29,279
NZ_SOQX01000012.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_112, whole genome shotgun sequence 22,324
NZ_SOQX01000013.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_113, whole genome shotgun sequence 15,682
NZ_SOQX01000014.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_114, whole genome shotgun sequence 11,398
NZ_SOQX01000015.1 Thiohalophilus thiocyanatoxydans strain DSM 16326 Ga0244672_115, whole genome shotgun sequence 1,052

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory