fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marimonas_A lutisalis GH1-19

Genome identifier: GCF_005434965.1

NCBI assembly name: ASM543496v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Marimonas_A, Marimonas_A lutisalis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Marimonas, Marimonas lutisalis

Scaffolds: 14

Genes: 4,260 Protein-coding: 4,151 RNAs: 50 pseudogenes: 59

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SKCI01000001.1 Marimonas lutisalis strain GH1-19 contig1, whole genome shotgun sequence 1,700,621
NZ_SKCI01000002.1 Marimonas lutisalis strain GH1-19 contig2, whole genome shotgun sequence 1,039,563
NZ_SKCI01000003.1 Marimonas lutisalis strain GH1-19 contig3, whole genome shotgun sequence 554,989
NZ_SKCI01000004.1 Marimonas lutisalis strain GH1-19 contig4, whole genome shotgun sequence 533,151
NZ_SKCI01000005.1 Marimonas lutisalis strain GH1-19 contig5, whole genome shotgun sequence 196,491
NZ_SKCI01000006.1 Marimonas lutisalis strain GH1-19 contig6, whole genome shotgun sequence 137,781
NZ_SKCI01000007.1 Marimonas lutisalis strain GH1-19 contig7, whole genome shotgun sequence 60,238
NZ_SKCI01000008.1 Marimonas lutisalis strain GH1-19 contig8, whole genome shotgun sequence 45,640
NZ_SKCI01000009.1 Marimonas lutisalis strain GH1-19 contig9, whole genome shotgun sequence 22,132
NZ_SKCI01000010.1 Marimonas lutisalis strain GH1-19 contig10, whole genome shotgun sequence 15,181
NZ_SKCI01000011.1 Marimonas lutisalis strain GH1-19 contig11, whole genome shotgun sequence 9,686
NZ_SKCI01000012.1 Marimonas lutisalis strain GH1-19 contig12, whole genome shotgun sequence 1,716
NZ_SKCI01000013.1 Marimonas lutisalis strain GH1-19 contig13, whole genome shotgun sequence 1,511
NZ_SKCI01000014.1 Marimonas lutisalis strain GH1-19 contig14, whole genome shotgun sequence 1,064

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory