fast.genomicscompare 6,575 genera of bacteria & archaea

 

Maribacter_C algarum RZ26

Genome identifier: GCF_005885635.1

NCBI assembly name: ASM588563v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Maribacter_C, Maribacter_C algarum

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Maribacter, Maribacter algarum

Scaffolds: 20

Genes: 4,436 Protein-coding: 4,373 RNAs: 58 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VATY01000001.1 Maribacter algarum strain RZ26 Scaffold1, whole genome shotgun sequence 2,066,491
NZ_VATY01000002.1 Maribacter algarum strain RZ26 Scaffold2, whole genome shotgun sequence 1,114,618
NZ_VATY01000003.1 Maribacter algarum strain RZ26 Scaffold3, whole genome shotgun sequence 764,813
NZ_VATY01000004.1 Maribacter algarum strain RZ26 Scaffold4, whole genome shotgun sequence 418,200
NZ_VATY01000005.1 Maribacter algarum strain RZ26 Scaffold5, whole genome shotgun sequence 415,506
NZ_VATY01000006.1 Maribacter algarum strain RZ26 Scaffold6, whole genome shotgun sequence 182,925
NZ_VATY01000007.1 Maribacter algarum strain RZ26 Scaffold7, whole genome shotgun sequence 97,473
NZ_VATY01000008.1 Maribacter algarum strain RZ26 Scaffold8, whole genome shotgun sequence 20,946
NZ_VATY01000009.1 Maribacter algarum strain RZ26 Scaffold9, whole genome shotgun sequence 11,195
NZ_VATY01000010.1 Maribacter algarum strain RZ26 Scaffold10, whole genome shotgun sequence 5,618
NZ_VATY01000011.1 Maribacter algarum strain RZ26 Scaffold11, whole genome shotgun sequence 2,618
NZ_VATY01000012.1 Maribacter algarum strain RZ26 Scaffold12, whole genome shotgun sequence 2,129
NZ_VATY01000013.1 Maribacter algarum strain RZ26 Scaffold13, whole genome shotgun sequence 1,832
NZ_VATY01000014.1 Maribacter algarum strain RZ26 Scaffold14, whole genome shotgun sequence 1,564
NZ_VATY01000015.1 Maribacter algarum strain RZ26 Scaffold15, whole genome shotgun sequence 1,384
NZ_VATY01000016.1 Maribacter algarum strain RZ26 Scaffold16, whole genome shotgun sequence 749
NZ_VATY01000017.1 Maribacter algarum strain RZ26 Scaffold17, whole genome shotgun sequence 748
NZ_VATY01000018.1 Maribacter algarum strain RZ26 Scaffold18, whole genome shotgun sequence 648
NZ_VATY01000019.1 Maribacter algarum strain RZ26 Scaffold19, whole genome shotgun sequence 628
NZ_VATY01000020.1 Maribacter algarum strain RZ26 Scaffold20, whole genome shotgun sequence 621

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory