fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ochrobactrum_B haematophila CCUG 38531

Genome identifier: GCF_005938105.1

NCBI assembly name: ASM593810v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Ochrobactrum_B, Ochrobactrum_B haematophila

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Brucellaceae, Brucella, Brucella haematophila

Scaffolds: 55

Genes: 5,194 Protein-coding: 5,051 RNAs: 61 pseudogenes: 82

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VCPE01000001.1 Brucella haematophila strain CCUG 38531 contig_1, whole genome shotgun sequence 597,669
NZ_VCPE01000002.1 Brucella haematophila strain CCUG 38531 contig_2, whole genome shotgun sequence 538,479
NZ_VCPE01000003.1 Brucella haematophila strain CCUG 38531 contig_3, whole genome shotgun sequence 525,231
NZ_VCPE01000004.1 Brucella haematophila strain CCUG 38531 contig_4, whole genome shotgun sequence 405,158
NZ_VCPE01000005.1 Brucella haematophila strain CCUG 38531 contig_5, whole genome shotgun sequence 305,754
NZ_VCPE01000006.1 Brucella haematophila strain CCUG 38531 contig_6, whole genome shotgun sequence 301,917
NZ_VCPE01000007.1 Brucella haematophila strain CCUG 38531 contig_7, whole genome shotgun sequence 95,630
NZ_VCPE01000008.1 Brucella haematophila strain CCUG 38531 contig_8, whole genome shotgun sequence 203,446
NZ_VCPE01000009.1 Brucella haematophila strain CCUG 38531 contig_9, whole genome shotgun sequence 276,154
NZ_VCPE01000010.1 Brucella haematophila strain CCUG 38531 contig_10, whole genome shotgun sequence 228,599
NZ_VCPE01000011.1 Brucella haematophila strain CCUG 38531 contig_11, whole genome shotgun sequence 216,703
NZ_VCPE01000012.1 Brucella haematophila strain CCUG 38531 contig_12, whole genome shotgun sequence 185,276
NZ_VCPE01000013.1 Brucella haematophila strain CCUG 38531 contig_13, whole genome shotgun sequence 173,229
NZ_VCPE01000014.1 Brucella haematophila strain CCUG 38531 contig_14, whole genome shotgun sequence 171,826
NZ_VCPE01000015.1 Brucella haematophila strain CCUG 38531 contig_15, whole genome shotgun sequence 156,506
NZ_VCPE01000016.1 Brucella haematophila strain CCUG 38531 contig_16, whole genome shotgun sequence 143,019
NZ_VCPE01000017.1 Brucella haematophila strain CCUG 38531 contig_17, whole genome shotgun sequence 7,951
NZ_VCPE01000018.1 Brucella haematophila strain CCUG 38531 contig_18, whole genome shotgun sequence 143,357
NZ_VCPE01000019.1 Brucella haematophila strain CCUG 38531 contig_19, whole genome shotgun sequence 126,685
NZ_VCPE01000020.1 Brucella haematophila strain CCUG 38531 contig_20, whole genome shotgun sequence 84,398
NZ_VCPE01000021.1 Brucella haematophila strain CCUG 38531 contig_21, whole genome shotgun sequence 78,121
NZ_VCPE01000022.1 Brucella haematophila strain CCUG 38531 contig_22, whole genome shotgun sequence 72,263
NZ_VCPE01000023.1 Brucella haematophila strain CCUG 38531 contig_23, whole genome shotgun sequence 56,692
NZ_VCPE01000024.1 Brucella haematophila strain CCUG 38531 contig_24, whole genome shotgun sequence 54,237
NZ_VCPE01000025.1 Brucella haematophila strain CCUG 38531 contig_25, whole genome shotgun sequence 48,551
NZ_VCPE01000026.1 Brucella haematophila strain CCUG 38531 contig_26, whole genome shotgun sequence 39,628
NZ_VCPE01000027.1 Brucella haematophila strain CCUG 38531 contig_27, whole genome shotgun sequence 33,864
NZ_VCPE01000028.1 Brucella haematophila strain CCUG 38531 contig_28, whole genome shotgun sequence 32,768
NZ_VCPE01000029.1 Brucella haematophila strain CCUG 38531 contig_29, whole genome shotgun sequence 23,445
NZ_VCPE01000030.1 Brucella haematophila strain CCUG 38531 contig_30, whole genome shotgun sequence 20,423
NZ_VCPE01000031.1 Brucella haematophila strain CCUG 38531 contig_31, whole genome shotgun sequence 19,492
NZ_VCPE01000032.1 Brucella haematophila strain CCUG 38531 contig_32, whole genome shotgun sequence 17,745
NZ_VCPE01000033.1 Brucella haematophila strain CCUG 38531 contig_33, whole genome shotgun sequence 12,753
NZ_VCPE01000034.1 Brucella haematophila strain CCUG 38531 contig_34, whole genome shotgun sequence 11,017
NZ_VCPE01000035.1 Brucella haematophila strain CCUG 38531 contig_35, whole genome shotgun sequence 10,104
NZ_VCPE01000036.1 Brucella haematophila strain CCUG 38531 contig_36, whole genome shotgun sequence 9,385
NZ_VCPE01000037.1 Brucella haematophila strain CCUG 38531 contig_37, whole genome shotgun sequence 9,023
NZ_VCPE01000038.1 Brucella haematophila strain CCUG 38531 contig_38, whole genome shotgun sequence 7,992
NZ_VCPE01000039.1 Brucella haematophila strain CCUG 38531 contig_39, whole genome shotgun sequence 7,987
NZ_VCPE01000040.1 Brucella haematophila strain CCUG 38531 contig_40, whole genome shotgun sequence 7,505
NZ_VCPE01000041.1 Brucella haematophila strain CCUG 38531 contig_41, whole genome shotgun sequence 6,987
NZ_VCPE01000042.1 Brucella haematophila strain CCUG 38531 contig_42, whole genome shotgun sequence 6,505
NZ_VCPE01000043.1 Brucella haematophila strain CCUG 38531 contig_43, whole genome shotgun sequence 6,198
NZ_VCPE01000044.1 Brucella haematophila strain CCUG 38531 contig_44, whole genome shotgun sequence 3,507
NZ_VCPE01000045.1 Brucella haematophila strain CCUG 38531 contig_45, whole genome shotgun sequence 3,273
NZ_VCPE01000046.1 Brucella haematophila strain CCUG 38531 contig_46, whole genome shotgun sequence 2,529
NZ_VCPE01000047.1 Brucella haematophila strain CCUG 38531 contig_47, whole genome shotgun sequence 2,495
NZ_VCPE01000048.1 Brucella haematophila strain CCUG 38531 contig_48, whole genome shotgun sequence 2,464
NZ_VCPE01000049.1 Brucella haematophila strain CCUG 38531 contig_49, whole genome shotgun sequence 1,606
NZ_VCPE01000050.1 Brucella haematophila strain CCUG 38531 contig_50, whole genome shotgun sequence 1,503
NZ_VCPE01000051.1 Brucella haematophila strain CCUG 38531 contig_51, whole genome shotgun sequence 1,414
NZ_VCPE01000052.1 Brucella haematophila strain CCUG 38531 contig_52, whole genome shotgun sequence 1,375
NZ_VCPE01000053.1 Brucella haematophila strain CCUG 38531 contig_53, whole genome shotgun sequence 1,302
NZ_VCPE01000054.1 Brucella haematophila strain CCUG 38531 contig_54, whole genome shotgun sequence 1,117
NZ_VCPE01000055.1 Brucella haematophila strain CCUG 38531 contig_55, whole genome shotgun sequence 1,005

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory