fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arenibacterium halophilum CAU 1492

Genome identifier: GCF_005938225.1

NCBI assembly name: ASM593822v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Arenibacterium, Arenibacterium halophilum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Arenibacterium, Arenibacterium halophilum

Scaffolds: 15

Genes: 4,437 Protein-coding: 4,343 RNAs: 50 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VCPC01000001.1 Arenibacterium halophilum strain CAU 1492 contig1, whole genome shotgun sequence 1,422,545
NZ_VCPC01000002.1 Arenibacterium halophilum strain CAU 1492 contig2, whole genome shotgun sequence 1,371,051
NZ_VCPC01000003.1 Arenibacterium halophilum strain CAU 1492 contig3, whole genome shotgun sequence 761,479
NZ_VCPC01000004.1 Arenibacterium halophilum strain CAU 1492 contig4, whole genome shotgun sequence 480,990
NZ_VCPC01000005.1 Arenibacterium halophilum strain CAU 1492 contig5, whole genome shotgun sequence 169,518
NZ_VCPC01000006.1 Arenibacterium halophilum strain CAU 1492 contig6, whole genome shotgun sequence 127,452
NZ_VCPC01000007.1 Arenibacterium halophilum strain CAU 1492 contig7, whole genome shotgun sequence 119,540
NZ_VCPC01000008.1 Arenibacterium halophilum strain CAU 1492 contig8, whole genome shotgun sequence 111,858
NZ_VCPC01000009.1 Arenibacterium halophilum strain CAU 1492 contig9, whole genome shotgun sequence 25,329
NZ_VCPC01000010.1 Arenibacterium halophilum strain CAU 1492 contig10, whole genome shotgun sequence 20,729
NZ_VCPC01000011.1 Arenibacterium halophilum strain CAU 1492 contig11, whole genome shotgun sequence 5,902
NZ_VCPC01000012.1 Arenibacterium halophilum strain CAU 1492 contig12, whole genome shotgun sequence 4,869
NZ_VCPC01000013.1 Arenibacterium halophilum strain CAU 1492 contig13, whole genome shotgun sequence 3,366
NZ_VCPC01000014.1 Arenibacterium halophilum strain CAU 1492 contig14, whole genome shotgun sequence 2,069
NZ_VCPC01000015.1 Arenibacterium halophilum strain CAU 1492 contig15, whole genome shotgun sequence 1,303

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory