fast.genomicscompare 6,575 genera of bacteria & archaea

 

Psychroflexus halotolerans WDS2C27

Genome identifier: GCF_006120725.1

NCBI assembly name: ASM612072v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Psychroflexus, Psychroflexus halotolerans

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Mesohalobacter, Mesohalobacter halotolerans

Scaffolds: 11

Genes: 2,430 Protein-coding: 2,369 RNAs: 47 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_SWMU01000001.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold1, whole genome shotgun sequence 963,267
NZ_SWMU01000002.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold2, whole genome shotgun sequence 607,857
NZ_SWMU01000003.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold3, whole genome shotgun sequence 596,361
NZ_SWMU01000004.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold4, whole genome shotgun sequence 263,040
NZ_SWMU01000005.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold5, whole genome shotgun sequence 136,233
NZ_SWMU01000006.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold6, whole genome shotgun sequence 72,604
NZ_SWMU01000007.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold7, whole genome shotgun sequence 5,356
NZ_SWMU01000008.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold8, whole genome shotgun sequence 2,955
NZ_SWMU01000009.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold9, whole genome shotgun sequence 2,056
NZ_SWMU01000010.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold10, whole genome shotgun sequence 1,006
NZ_SWMU01000011.1 Mesohalobacter halotolerans strain WDS2C27 Scaffold11, whole genome shotgun sequence 521

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory