fast.genomicscompare 6,575 genera of bacteria & archaea

 

Gluconobacter oxydans NBRC 14819

Genome identifier: GCF_006539685.1

NCBI assembly name: ASM653968v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Gluconobacter, Gluconobacter oxydans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Gluconobacter, Gluconobacter oxydans

Scaffolds: 107

Genes: 2,583 Protein-coding: 2,477 RNAs: 52 pseudogenes: 54

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BJNM01000001.1 Gluconobacter oxydans strain NBRC 14819 sequence001, whole genome shotgun sequence 219,528
NZ_BJNM01000002.1 Gluconobacter oxydans strain NBRC 14819 sequence002, whole genome shotgun sequence 199,640
NZ_BJNM01000003.1 Gluconobacter oxydans strain NBRC 14819 sequence003, whole genome shotgun sequence 191,836
NZ_BJNM01000004.1 Gluconobacter oxydans strain NBRC 14819 sequence004, whole genome shotgun sequence 135,865
NZ_BJNM01000005.1 Gluconobacter oxydans strain NBRC 14819 sequence005, whole genome shotgun sequence 106,033
NZ_BJNM01000006.1 Gluconobacter oxydans strain NBRC 14819 sequence006, whole genome shotgun sequence 104,972
NZ_BJNM01000007.1 Gluconobacter oxydans strain NBRC 14819 sequence007, whole genome shotgun sequence 103,370
NZ_BJNM01000008.1 Gluconobacter oxydans strain NBRC 14819 sequence008, whole genome shotgun sequence 102,179
NZ_BJNM01000009.1 Gluconobacter oxydans strain NBRC 14819 sequence009, whole genome shotgun sequence 100,783
NZ_BJNM01000010.1 Gluconobacter oxydans strain NBRC 14819 sequence010, whole genome shotgun sequence 90,569
NZ_BJNM01000011.1 Gluconobacter oxydans strain NBRC 14819 sequence011, whole genome shotgun sequence 88,130
NZ_BJNM01000012.1 Gluconobacter oxydans strain NBRC 14819 sequence012, whole genome shotgun sequence 68,327
NZ_BJNM01000013.1 Gluconobacter oxydans strain NBRC 14819 sequence013, whole genome shotgun sequence 67,712
NZ_BJNM01000014.1 Gluconobacter oxydans strain NBRC 14819 sequence014, whole genome shotgun sequence 65,086
NZ_BJNM01000015.1 Gluconobacter oxydans strain NBRC 14819 sequence015, whole genome shotgun sequence 64,607
NZ_BJNM01000016.1 Gluconobacter oxydans strain NBRC 14819 sequence016, whole genome shotgun sequence 63,391
NZ_BJNM01000017.1 Gluconobacter oxydans strain NBRC 14819 sequence017, whole genome shotgun sequence 63,104
NZ_BJNM01000018.1 Gluconobacter oxydans strain NBRC 14819 sequence018, whole genome shotgun sequence 61,915
NZ_BJNM01000019.1 Gluconobacter oxydans strain NBRC 14819 sequence019, whole genome shotgun sequence 51,622
NZ_BJNM01000020.1 Gluconobacter oxydans strain NBRC 14819 sequence020, whole genome shotgun sequence 48,702
NZ_BJNM01000021.1 Gluconobacter oxydans strain NBRC 14819 sequence021, whole genome shotgun sequence 42,144
NZ_BJNM01000022.1 Gluconobacter oxydans strain NBRC 14819 sequence022, whole genome shotgun sequence 36,795
NZ_BJNM01000023.1 Gluconobacter oxydans strain NBRC 14819 sequence023, whole genome shotgun sequence 35,360
NZ_BJNM01000024.1 Gluconobacter oxydans strain NBRC 14819 sequence024, whole genome shotgun sequence 33,808
NZ_BJNM01000025.1 Gluconobacter oxydans strain NBRC 14819 sequence025, whole genome shotgun sequence 28,054
NZ_BJNM01000026.1 Gluconobacter oxydans strain NBRC 14819 sequence026, whole genome shotgun sequence 26,473
NZ_BJNM01000027.1 Gluconobacter oxydans strain NBRC 14819 sequence027, whole genome shotgun sequence 25,126
NZ_BJNM01000028.1 Gluconobacter oxydans strain NBRC 14819 sequence028, whole genome shotgun sequence 21,963
NZ_BJNM01000029.1 Gluconobacter oxydans strain NBRC 14819 sequence029, whole genome shotgun sequence 20,711
NZ_BJNM01000030.1 Gluconobacter oxydans strain NBRC 14819 sequence030, whole genome shotgun sequence 19,671
NZ_BJNM01000031.1 Gluconobacter oxydans strain NBRC 14819 sequence031, whole genome shotgun sequence 19,320
NZ_BJNM01000032.1 Gluconobacter oxydans strain NBRC 14819 sequence032, whole genome shotgun sequence 17,502
NZ_BJNM01000033.1 Gluconobacter oxydans strain NBRC 14819 sequence033, whole genome shotgun sequence 16,142
NZ_BJNM01000034.1 Gluconobacter oxydans strain NBRC 14819 sequence034, whole genome shotgun sequence 15,991
NZ_BJNM01000035.1 Gluconobacter oxydans strain NBRC 14819 sequence035, whole genome shotgun sequence 15,337
NZ_BJNM01000036.1 Gluconobacter oxydans strain NBRC 14819 sequence036, whole genome shotgun sequence 15,225
NZ_BJNM01000037.1 Gluconobacter oxydans strain NBRC 14819 sequence037, whole genome shotgun sequence 14,458
NZ_BJNM01000038.1 Gluconobacter oxydans strain NBRC 14819 sequence038, whole genome shotgun sequence 14,318
NZ_BJNM01000039.1 Gluconobacter oxydans strain NBRC 14819 sequence039, whole genome shotgun sequence 14,237
NZ_BJNM01000040.1 Gluconobacter oxydans strain NBRC 14819 sequence040, whole genome shotgun sequence 12,428
NZ_BJNM01000041.1 Gluconobacter oxydans strain NBRC 14819 sequence041, whole genome shotgun sequence 12,401
NZ_BJNM01000042.1 Gluconobacter oxydans strain NBRC 14819 sequence042, whole genome shotgun sequence 12,368
NZ_BJNM01000043.1 Gluconobacter oxydans strain NBRC 14819 sequence043, whole genome shotgun sequence 12,107
NZ_BJNM01000044.1 Gluconobacter oxydans strain NBRC 14819 sequence044, whole genome shotgun sequence 11,022
NZ_BJNM01000045.1 Gluconobacter oxydans strain NBRC 14819 sequence045, whole genome shotgun sequence 10,541
NZ_BJNM01000046.1 Gluconobacter oxydans strain NBRC 14819 sequence046, whole genome shotgun sequence 10,353
NZ_BJNM01000047.1 Gluconobacter oxydans strain NBRC 14819 sequence047, whole genome shotgun sequence 9,332
NZ_BJNM01000048.1 Gluconobacter oxydans strain NBRC 14819 sequence048, whole genome shotgun sequence 9,023
NZ_BJNM01000049.1 Gluconobacter oxydans strain NBRC 14819 sequence049, whole genome shotgun sequence 8,775
NZ_BJNM01000050.1 Gluconobacter oxydans strain NBRC 14819 sequence050, whole genome shotgun sequence 8,493
NZ_BJNM01000051.1 Gluconobacter oxydans strain NBRC 14819 sequence051, whole genome shotgun sequence 7,478
NZ_BJNM01000052.1 Gluconobacter oxydans strain NBRC 14819 sequence052, whole genome shotgun sequence 7,061
NZ_BJNM01000053.1 Gluconobacter oxydans strain NBRC 14819 sequence053, whole genome shotgun sequence 6,786
NZ_BJNM01000054.1 Gluconobacter oxydans strain NBRC 14819 sequence054, whole genome shotgun sequence 6,227
NZ_BJNM01000055.1 Gluconobacter oxydans strain NBRC 14819 sequence055, whole genome shotgun sequence 6,197
NZ_BJNM01000056.1 Gluconobacter oxydans strain NBRC 14819 sequence056, whole genome shotgun sequence 5,520
NZ_BJNM01000057.1 Gluconobacter oxydans strain NBRC 14819 sequence057, whole genome shotgun sequence 5,508
NZ_BJNM01000058.1 Gluconobacter oxydans strain NBRC 14819 sequence058, whole genome shotgun sequence 5,442
NZ_BJNM01000059.1 Gluconobacter oxydans strain NBRC 14819 sequence059, whole genome shotgun sequence 5,373
NZ_BJNM01000060.1 Gluconobacter oxydans strain NBRC 14819 sequence060, whole genome shotgun sequence 5,276
NZ_BJNM01000061.1 Gluconobacter oxydans strain NBRC 14819 sequence061, whole genome shotgun sequence 4,339
NZ_BJNM01000062.1 Gluconobacter oxydans strain NBRC 14819 sequence062, whole genome shotgun sequence 4,660
NZ_BJNM01000063.1 Gluconobacter oxydans strain NBRC 14819 sequence063, whole genome shotgun sequence 4,374
NZ_BJNM01000064.1 Gluconobacter oxydans strain NBRC 14819 sequence064, whole genome shotgun sequence 3,868
NZ_BJNM01000065.1 Gluconobacter oxydans strain NBRC 14819 sequence065, whole genome shotgun sequence 3,867
NZ_BJNM01000066.1 Gluconobacter oxydans strain NBRC 14819 sequence066, whole genome shotgun sequence 3,768
NZ_BJNM01000067.1 Gluconobacter oxydans strain NBRC 14819 sequence067, whole genome shotgun sequence 3,672
NZ_BJNM01000068.1 Gluconobacter oxydans strain NBRC 14819 sequence068, whole genome shotgun sequence 3,671
NZ_BJNM01000069.1 Gluconobacter oxydans strain NBRC 14819 sequence069, whole genome shotgun sequence 3,526
NZ_BJNM01000070.1 Gluconobacter oxydans strain NBRC 14819 sequence070, whole genome shotgun sequence 3,460
NZ_BJNM01000071.1 Gluconobacter oxydans strain NBRC 14819 sequence071, whole genome shotgun sequence 3,449
NZ_BJNM01000072.1 Gluconobacter oxydans strain NBRC 14819 sequence072, whole genome shotgun sequence 3,447
NZ_BJNM01000073.1 Gluconobacter oxydans strain NBRC 14819 sequence073, whole genome shotgun sequence 3,304
NZ_BJNM01000074.1 Gluconobacter oxydans strain NBRC 14819 sequence074, whole genome shotgun sequence 3,264
NZ_BJNM01000075.1 Gluconobacter oxydans strain NBRC 14819 sequence075, whole genome shotgun sequence 3,171
NZ_BJNM01000076.1 Gluconobacter oxydans strain NBRC 14819 sequence076, whole genome shotgun sequence 3,072
NZ_BJNM01000077.1 Gluconobacter oxydans strain NBRC 14819 sequence077, whole genome shotgun sequence 3,007
NZ_BJNM01000078.1 Gluconobacter oxydans strain NBRC 14819 sequence078, whole genome shotgun sequence 2,945
NZ_BJNM01000079.1 Gluconobacter oxydans strain NBRC 14819 sequence079, whole genome shotgun sequence 2,780
NZ_BJNM01000080.1 Gluconobacter oxydans strain NBRC 14819 sequence080, whole genome shotgun sequence 2,774
NZ_BJNM01000081.1 Gluconobacter oxydans strain NBRC 14819 sequence081, whole genome shotgun sequence 2,624
NZ_BJNM01000082.1 Gluconobacter oxydans strain NBRC 14819 sequence082, whole genome shotgun sequence 2,546
NZ_BJNM01000083.1 Gluconobacter oxydans strain NBRC 14819 sequence083, whole genome shotgun sequence 2,386
NZ_BJNM01000084.1 Gluconobacter oxydans strain NBRC 14819 sequence084, whole genome shotgun sequence 1,742
NZ_BJNM01000085.1 Gluconobacter oxydans strain NBRC 14819 sequence085, whole genome shotgun sequence 1,679
NZ_BJNM01000086.1 Gluconobacter oxydans strain NBRC 14819 sequence086, whole genome shotgun sequence 1,655
NZ_BJNM01000087.1 Gluconobacter oxydans strain NBRC 14819 sequence087, whole genome shotgun sequence 1,635
NZ_BJNM01000088.1 Gluconobacter oxydans strain NBRC 14819 sequence088, whole genome shotgun sequence 1,433
NZ_BJNM01000089.1 Gluconobacter oxydans strain NBRC 14819 sequence089, whole genome shotgun sequence 1,404
NZ_BJNM01000090.1 Gluconobacter oxydans strain NBRC 14819 sequence090, whole genome shotgun sequence 1,383
NZ_BJNM01000091.1 Gluconobacter oxydans strain NBRC 14819 sequence091, whole genome shotgun sequence 1,305
NZ_BJNM01000092.1 Gluconobacter oxydans strain NBRC 14819 sequence092, whole genome shotgun sequence 1,039
NZ_BJNM01000093.1 Gluconobacter oxydans strain NBRC 14819 sequence093, whole genome shotgun sequence 1,011
NZ_BJNM01000094.1 Gluconobacter oxydans strain NBRC 14819 sequence094, whole genome shotgun sequence 876
NZ_BJNM01000095.1 Gluconobacter oxydans strain NBRC 14819 sequence095, whole genome shotgun sequence 833
NZ_BJNM01000096.1 Gluconobacter oxydans strain NBRC 14819 sequence096, whole genome shotgun sequence 832
NZ_BJNM01000097.1 Gluconobacter oxydans strain NBRC 14819 sequence097, whole genome shotgun sequence 733
NZ_BJNM01000098.1 Gluconobacter oxydans strain NBRC 14819 sequence098, whole genome shotgun sequence 729
NZ_BJNM01000099.1 Gluconobacter oxydans strain NBRC 14819 sequence099, whole genome shotgun sequence 651
NZ_BJNM01000100.1 Gluconobacter oxydans strain NBRC 14819 sequence100, whole genome shotgun sequence 625
NZ_BJNM01000101.1 Gluconobacter oxydans strain NBRC 14819 sequence101, whole genome shotgun sequence 611
NZ_BJNM01000102.1 Gluconobacter oxydans strain NBRC 14819 sequence102, whole genome shotgun sequence 586
NZ_BJNM01000103.1 Gluconobacter oxydans strain NBRC 14819 sequence103, whole genome shotgun sequence 550
NZ_BJNM01000104.1 Gluconobacter oxydans strain NBRC 14819 sequence104, whole genome shotgun sequence 549
NZ_BJNM01000105.1 Gluconobacter oxydans strain NBRC 14819 sequence105, whole genome shotgun sequence 543
NZ_BJNM01000106.1 Gluconobacter oxydans strain NBRC 14819 sequence106, whole genome shotgun sequence 521
NZ_BJNM01000107.1 Gluconobacter oxydans strain NBRC 14819 sequence107, whole genome shotgun sequence 510

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory