fast.genomicscompare 6,575 genera of bacteria & archaea

 

Formicincola oecophyllae F3b2

Genome identifier: GCF_006542395.2

NCBI assembly name: ASM654239v2

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Formicincola, Formicincola oecophyllae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Formicincola, Formicincola oecophyllae

Scaffolds: 3

Genes: 1,740 Protein-coding: 1,671 RNAs: 54 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP038231.1 Formicincola oecophyllae strain F3b2 chromosome, complete genome 1,945,806
NZ_CP038232.1 Formicincola oecophyllae strain F3b2 plasmid unnamed1, complete sequence 6,500
NZ_CP042424.1 Formicincola oecophyllae strain F3b2 plasmid unnamed2, complete sequence 9,362

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory