fast.genomicscompare 6,575 genera of bacteria & archaea

 

Paraclostridium dentum ATCC 638

Genome identifier: GCF_006802875.1

NCBI assembly name: ASM680287v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Peptostreptococcaceae, Paraclostridium, Paraclostridium dentum

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Paraclostridium, Paraclostridium bifermentans

Scaffolds: 39

Genes: 3,548 Protein-coding: 3,489 RNAs: 31 pseudogenes: 28

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CM017267.1 Paraclostridium bifermentans strain ATCC 638 plasmid p14Cb, whole genome shotgun sequence 14,767
NZ_QZNC01000001.1 Paraclostridium bifermentans strain ATCC 638 scaffold1, whole genome shotgun sequence 78,199
NZ_QZNC01000002.1 Paraclostridium bifermentans strain ATCC 638 scaffold2, whole genome shotgun sequence 141,288
NZ_QZNC01000003.1 Paraclostridium bifermentans strain ATCC 638 scaffold3, whole genome shotgun sequence 127,529
NZ_QZNC01000004.1 Paraclostridium bifermentans strain ATCC 638 scaffold4, whole genome shotgun sequence 150,140
NZ_QZNC01000005.1 Paraclostridium bifermentans strain ATCC 638 scaffold5, whole genome shotgun sequence 664,131
NZ_QZNC01000006.1 Paraclostridium bifermentans strain ATCC 638 scaffold6, whole genome shotgun sequence 1,057,015
NZ_QZNC01000007.1 Paraclostridium bifermentans strain ATCC 638 scaffold7, whole genome shotgun sequence 930
NZ_QZNC01000008.1 Paraclostridium bifermentans strain ATCC 638 scaffold8, whole genome shotgun sequence 175,549
NZ_QZNC01000009.1 Paraclostridium bifermentans strain ATCC 638 scaffold9, whole genome shotgun sequence 2,078
NZ_QZNC01000010.1 Paraclostridium bifermentans strain ATCC 638 scaffold10, whole genome shotgun sequence 1,806
NZ_QZNC01000011.1 Paraclostridium bifermentans strain ATCC 638 scaffold11, whole genome shotgun sequence 25,452
NZ_QZNC01000012.1 Paraclostridium bifermentans strain ATCC 638 scaffold12, whole genome shotgun sequence 82,310
NZ_QZNC01000013.1 Paraclostridium bifermentans strain ATCC 638 scaffold13, whole genome shotgun sequence 46,566
NZ_QZNC01000014.1 Paraclostridium bifermentans strain ATCC 638 scaffold14, whole genome shotgun sequence 1,041
NZ_QZNC01000015.1 Paraclostridium bifermentans strain ATCC 638 scaffold15, whole genome shotgun sequence 22,667
NZ_QZNC01000016.1 Paraclostridium bifermentans strain ATCC 638 scaffold16, whole genome shotgun sequence 152,485
NZ_QZNC01000017.1 Paraclostridium bifermentans strain ATCC 638 scaffold17, whole genome shotgun sequence 6,735
NZ_QZNC01000018.1 Paraclostridium bifermentans strain ATCC 638 scaffold18, whole genome shotgun sequence 76,429
NZ_QZNC01000019.1 Paraclostridium bifermentans strain ATCC 638 scaffold19, whole genome shotgun sequence 101,878
NZ_QZNC01000020.1 Paraclostridium bifermentans strain ATCC 638 scaffold20, whole genome shotgun sequence 213,403
NZ_QZNC01000021.1 Paraclostridium bifermentans strain ATCC 638 scaffold21, whole genome shotgun sequence 2,011
NZ_QZNC01000022.1 Paraclostridium bifermentans strain ATCC 638 scaffold22, whole genome shotgun sequence 6,297
NZ_QZNC01000023.1 Paraclostridium bifermentans strain ATCC 638 scaffold23, whole genome shotgun sequence 46,701
NZ_QZNC01000024.1 Paraclostridium bifermentans strain ATCC 638 scaffold24, whole genome shotgun sequence 150,438
NZ_QZNC01000025.1 Paraclostridium bifermentans strain ATCC 638 scaffold25, whole genome shotgun sequence 116,361
NZ_QZNC01000026.1 Paraclostridium bifermentans strain ATCC 638 scaffold26, whole genome shotgun sequence 9,278
NZ_QZNC01000027.1 Paraclostridium bifermentans strain ATCC 638 C1095, whole genome shotgun sequence 643
NZ_QZNC01000028.1 Paraclostridium bifermentans strain ATCC 638 C1097, whole genome shotgun sequence 866
NZ_QZNC01000029.1 Paraclostridium bifermentans strain ATCC 638 C1099, whole genome shotgun sequence 884
NZ_QZNC01000030.1 Paraclostridium bifermentans strain ATCC 638 C1107, whole genome shotgun sequence 1,059
NZ_QZNC01000031.1 Paraclostridium bifermentans strain ATCC 638 C1109, whole genome shotgun sequence 1,114
NZ_QZNC01000032.1 Paraclostridium bifermentans strain ATCC 638 C1111, whole genome shotgun sequence 1,155
NZ_QZNC01000033.1 Paraclostridium bifermentans strain ATCC 638 C1117, whole genome shotgun sequence 1,312
NZ_QZNC01000034.1 Paraclostridium bifermentans strain ATCC 638 C1119, whole genome shotgun sequence 1,404
NZ_QZNC01000035.1 Paraclostridium bifermentans strain ATCC 638 C1161, whole genome shotgun sequence 4,090
NZ_QZNC01000037.1 Paraclostridium bifermentans strain ATCC 638 C1201, whole genome shotgun sequence 19,176
NZ_QZNC01000038.1 Paraclostridium bifermentans strain ATCC 638 C1223, whole genome shotgun sequence 36,361
NZ_QZNC01000039.1 Paraclostridium bifermentans strain ATCC 638 C1227, whole genome shotgun sequence 36,825

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory