fast.genomicscompare 6,575 genera of bacteria & archaea

 

Denitrobaculum tricleocarpae R148

Genome identifier: GCF_007004665.1

NCBI assembly name: ASM700466v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Kiloniellales, Kiloniellaceae, Denitrobaculum, Denitrobaculum tricleocarpae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Denitrobaculum, Denitrobaculum tricleocarpae

Scaffolds: 35

Genes: 5,933 Protein-coding: 5,832 RNAs: 57 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ML660052.1 Denitrobaculum tricleocarpae strain R148 Scaffold1, whole genome shotgun sequence 1,059,607
NZ_ML660053.1 Denitrobaculum tricleocarpae strain R148 Scaffold2, whole genome shotgun sequence 877,453
NZ_ML660054.1 Denitrobaculum tricleocarpae strain R148 Scaffold3, whole genome shotgun sequence 688,169
NZ_ML660055.1 Denitrobaculum tricleocarpae strain R148 Scaffold4, whole genome shotgun sequence 534,451
NZ_ML660056.1 Denitrobaculum tricleocarpae strain R148 Scaffold5, whole genome shotgun sequence 492,275
NZ_ML660057.1 Denitrobaculum tricleocarpae strain R148 Scaffold6, whole genome shotgun sequence 448,200
NZ_ML660058.1 Denitrobaculum tricleocarpae strain R148 Scaffold7, whole genome shotgun sequence 364,382
NZ_ML660059.1 Denitrobaculum tricleocarpae strain R148 Scaffold8, whole genome shotgun sequence 362,737
NZ_ML660060.1 Denitrobaculum tricleocarpae strain R148 Scaffold9, whole genome shotgun sequence 299,336
NZ_ML660061.1 Denitrobaculum tricleocarpae strain R148 Scaffold10, whole genome shotgun sequence 241,688
NZ_ML660062.1 Denitrobaculum tricleocarpae strain R148 Scaffold11, whole genome shotgun sequence 192,489
NZ_ML660063.1 Denitrobaculum tricleocarpae strain R148 Scaffold12, whole genome shotgun sequence 138,188
NZ_ML660064.1 Denitrobaculum tricleocarpae strain R148 Scaffold13, whole genome shotgun sequence 126,100
NZ_ML660065.1 Denitrobaculum tricleocarpae strain R148 Scaffold14, whole genome shotgun sequence 100,667
NZ_ML660066.1 Denitrobaculum tricleocarpae strain R148 Scaffold15, whole genome shotgun sequence 83,778
NZ_ML660067.1 Denitrobaculum tricleocarpae strain R148 Scaffold16, whole genome shotgun sequence 63,057
NZ_ML660068.1 Denitrobaculum tricleocarpae strain R148 Scaffold17, whole genome shotgun sequence 57,005
NZ_ML660069.1 Denitrobaculum tricleocarpae strain R148 Scaffold18, whole genome shotgun sequence 51,346
NZ_ML660070.1 Denitrobaculum tricleocarpae strain R148 Scaffold19, whole genome shotgun sequence 49,364
NZ_ML660071.1 Denitrobaculum tricleocarpae strain R148 Scaffold20, whole genome shotgun sequence 42,428
NZ_ML660072.1 Denitrobaculum tricleocarpae strain R148 Scaffold21, whole genome shotgun sequence 36,026
NZ_ML660073.1 Denitrobaculum tricleocarpae strain R148 Scaffold22, whole genome shotgun sequence 26,947
NZ_ML660074.1 Denitrobaculum tricleocarpae strain R148 Scaffold23, whole genome shotgun sequence 25,387
NZ_ML660075.1 Denitrobaculum tricleocarpae strain R148 Scaffold24, whole genome shotgun sequence 24,055
NZ_ML660076.1 Denitrobaculum tricleocarpae strain R148 Scaffold25, whole genome shotgun sequence 17,885
NZ_ML660077.1 Denitrobaculum tricleocarpae strain R148 Scaffold26, whole genome shotgun sequence 13,276
NZ_ML660078.1 Denitrobaculum tricleocarpae strain R148 Scaffold27, whole genome shotgun sequence 9,161
NZ_ML660079.1 Denitrobaculum tricleocarpae strain R148 Scaffold28, whole genome shotgun sequence 5,775
NZ_ML660080.1 Denitrobaculum tricleocarpae strain R148 Scaffold29, whole genome shotgun sequence 2,995
NZ_ML660081.1 Denitrobaculum tricleocarpae strain R148 Scaffold30, whole genome shotgun sequence 1,750
NZ_ML660082.1 Denitrobaculum tricleocarpae strain R148 Scaffold31, whole genome shotgun sequence 1,684
NZ_ML660083.1 Denitrobaculum tricleocarpae strain R148 Scaffold32, whole genome shotgun sequence 1,305
NZ_ML660084.1 Denitrobaculum tricleocarpae strain R148 Scaffold33, whole genome shotgun sequence 1,293
NZ_ML660085.1 Denitrobaculum tricleocarpae strain R148 Scaffold34, whole genome shotgun sequence 1,017
NZ_ML660086.1 Denitrobaculum tricleocarpae strain R148 Scaffold35, whole genome shotgun sequence 908

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory