fast.genomicscompare 6,575 genera of bacteria & archaea

 

Haloglomus irregulare F16-60

Genome identifier: GCF_007421925.1

NCBI assembly name: ASM742192v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloarculaceae, Haloglomus, Haloglomus irregulare

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Halobacteriales, Haloarculaceae, Haloglomus, Haloglomus irregulare

Scaffolds: 53

Genes: 4,037 Protein-coding: 3,852 RNAs: 58 pseudogenes: 127

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_QMDX01000001.1 Haloglomus irregulare strain F16-60 NODE_1_length_710421_cov_196.849, whole genome shotgun sequence 710,421
NZ_QMDX01000002.1 Haloglomus irregulare strain F16-60 NODE_2_length_475377_cov_201.487, whole genome shotgun sequence 475,377
NZ_QMDX01000003.1 Haloglomus irregulare strain F16-60 NODE_3_length_382874_cov_207.373, whole genome shotgun sequence 382,874
NZ_QMDX01000004.1 Haloglomus irregulare strain F16-60 NODE_4_length_284688_cov_188.112, whole genome shotgun sequence 284,688
NZ_QMDX01000005.1 Haloglomus irregulare strain F16-60 NODE_5_length_274728_cov_188.774, whole genome shotgun sequence 274,728
NZ_QMDX01000006.1 Haloglomus irregulare strain F16-60 NODE_6_length_189300_cov_207.077, whole genome shotgun sequence 189,300
NZ_QMDX01000007.1 Haloglomus irregulare strain F16-60 NODE_7_length_179112_cov_160.784, whole genome shotgun sequence 179,112
NZ_QMDX01000008.1 Haloglomus irregulare strain F16-60 NODE_8_length_157944_cov_202.743, whole genome shotgun sequence 157,944
NZ_QMDX01000009.1 Haloglomus irregulare strain F16-60 NODE_9_length_155720_cov_204.608, whole genome shotgun sequence 155,720
NZ_QMDX01000010.1 Haloglomus irregulare strain F16-60 NODE_10_length_138543_cov_199.501, whole genome shotgun sequence 138,543
NZ_QMDX01000011.1 Haloglomus irregulare strain F16-60 NODE_11_length_119907_cov_188.03, whole genome shotgun sequence 119,907
NZ_QMDX01000012.1 Haloglomus irregulare strain F16-60 NODE_12_length_106909_cov_185.498, whole genome shotgun sequence 106,909
NZ_QMDX01000013.1 Haloglomus irregulare strain F16-60 NODE_13_length_100701_cov_210.59, whole genome shotgun sequence 100,701
NZ_QMDX01000014.1 Haloglomus irregulare strain F16-60 NODE_14_length_61843_cov_194.926, whole genome shotgun sequence 61,843
NZ_QMDX01000015.1 Haloglomus irregulare strain F16-60 NODE_15_length_55271_cov_180.307, whole genome shotgun sequence 55,271
NZ_QMDX01000016.1 Haloglomus irregulare strain F16-60 NODE_16_length_46426_cov_231.602, whole genome shotgun sequence 46,426
NZ_QMDX01000017.1 Haloglomus irregulare strain F16-60 NODE_17_length_46367_cov_174.254, whole genome shotgun sequence 46,367
NZ_QMDX01000018.1 Haloglomus irregulare strain F16-60 NODE_18_length_35352_cov_179.457, whole genome shotgun sequence 35,352
NZ_QMDX01000019.1 Haloglomus irregulare strain F16-60 NODE_19_length_32236_cov_169.323, whole genome shotgun sequence 32,236
NZ_QMDX01000020.1 Haloglomus irregulare strain F16-60 NODE_20_length_30263_cov_194.021, whole genome shotgun sequence 30,263
NZ_QMDX01000021.1 Haloglomus irregulare strain F16-60 NODE_21_length_28242_cov_151.553, whole genome shotgun sequence 28,242
NZ_QMDX01000022.1 Haloglomus irregulare strain F16-60 NODE_22_length_28078_cov_203.309, whole genome shotgun sequence 28,078
NZ_QMDX01000023.1 Haloglomus irregulare strain F16-60 NODE_23_length_27554_cov_840.608, whole genome shotgun sequence 27,554
NZ_QMDX01000024.1 Haloglomus irregulare strain F16-60 NODE_24_length_25671_cov_182.765, whole genome shotgun sequence 25,671
NZ_QMDX01000025.1 Haloglomus irregulare strain F16-60 NODE_25_length_25600_cov_181.62, whole genome shotgun sequence 25,600
NZ_QMDX01000026.1 Haloglomus irregulare strain F16-60 NODE_26_length_25522_cov_214.057, whole genome shotgun sequence 25,522
NZ_QMDX01000027.1 Haloglomus irregulare strain F16-60 NODE_27_length_24255_cov_185.133, whole genome shotgun sequence 24,255
NZ_QMDX01000028.1 Haloglomus irregulare strain F16-60 NODE_28_length_24025_cov_140.326, whole genome shotgun sequence 24,025
NZ_QMDX01000029.1 Haloglomus irregulare strain F16-60 NODE_29_length_22949_cov_166.873, whole genome shotgun sequence 22,949
NZ_QMDX01000030.1 Haloglomus irregulare strain F16-60 NODE_30_length_21363_cov_187.859, whole genome shotgun sequence 21,363
NZ_QMDX01000031.1 Haloglomus irregulare strain F16-60 NODE_31_length_15792_cov_775.966, whole genome shotgun sequence 15,792
NZ_QMDX01000032.1 Haloglomus irregulare strain F16-60 NODE_32_length_14626_cov_153.914, whole genome shotgun sequence 14,626
NZ_QMDX01000033.1 Haloglomus irregulare strain F16-60 NODE_33_length_12635_cov_172.859, whole genome shotgun sequence 12,635
NZ_QMDX01000034.1 Haloglomus irregulare strain F16-60 NODE_34_length_12421_cov_125.631, whole genome shotgun sequence 12,421
NZ_QMDX01000035.1 Haloglomus irregulare strain F16-60 NODE_35_length_12050_cov_184.317, whole genome shotgun sequence 12,050
NZ_QMDX01000036.1 Haloglomus irregulare strain F16-60 NODE_36_length_10718_cov_168.329, whole genome shotgun sequence 10,718
NZ_QMDX01000037.1 Haloglomus irregulare strain F16-60 NODE_37_length_10264_cov_174.349, whole genome shotgun sequence 10,264
NZ_QMDX01000038.1 Haloglomus irregulare strain F16-60 NODE_38_length_9509_cov_163.898, whole genome shotgun sequence 9,509
NZ_QMDX01000039.1 Haloglomus irregulare strain F16-60 NODE_39_length_9226_cov_181.972, whole genome shotgun sequence 9,226
NZ_QMDX01000040.1 Haloglomus irregulare strain F16-60 NODE_40_length_7229_cov_115.927, whole genome shotgun sequence 7,229
NZ_QMDX01000041.1 Haloglomus irregulare strain F16-60 NODE_41_length_6776_cov_191.919, whole genome shotgun sequence 6,776
NZ_QMDX01000042.1 Haloglomus irregulare strain F16-60 NODE_42_length_6603_cov_152.046, whole genome shotgun sequence 6,603
NZ_QMDX01000043.1 Haloglomus irregulare strain F16-60 NODE_43_length_6434_cov_198.911, whole genome shotgun sequence 6,434
NZ_QMDX01000044.1 Haloglomus irregulare strain F16-60 NODE_44_length_6060_cov_174.37, whole genome shotgun sequence 6,060
NZ_QMDX01000045.1 Haloglomus irregulare strain F16-60 NODE_45_length_5929_cov_168.851, whole genome shotgun sequence 5,929
NZ_QMDX01000046.1 Haloglomus irregulare strain F16-60 NODE_47_length_5384_cov_160.797, whole genome shotgun sequence 5,384
NZ_QMDX01000047.1 Haloglomus irregulare strain F16-60 NODE_48_length_4378_cov_186.494, whole genome shotgun sequence 4,378
NZ_QMDX01000048.1 Haloglomus irregulare strain F16-60 NODE_49_length_3348_cov_169.876, whole genome shotgun sequence 3,348
NZ_QMDX01000049.1 Haloglomus irregulare strain F16-60 NODE_50_length_2394_cov_3.78837, whole genome shotgun sequence 2,394
NZ_QMDX01000050.1 Haloglomus irregulare strain F16-60 NODE_51_length_1738_cov_76.65, whole genome shotgun sequence 1,738
NZ_QMDX01000051.1 Haloglomus irregulare strain F16-60 NODE_52_length_1396_cov_394.315, whole genome shotgun sequence 1,396
NZ_QMDX01000052.1 Haloglomus irregulare strain F16-60 NODE_53_length_1194_cov_228.477, whole genome shotgun sequence 1,194
NZ_QMDX01000053.1 Haloglomus irregulare strain F16-60 NODE_54_length_1017_cov_151.807, whole genome shotgun sequence 1,017

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory