fast.genomicscompare 6,575 genera of bacteria & archaea

 

Luteimonas_C cucumeris CGMCC 1.10821

Genome identifier: GCF_007830035.1

NCBI assembly name: ASM783003v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Luteimonas_C, Luteimonas_C cucumeris

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Luteimonas, Luteimonas cucumeris

Scaffolds: 26

Genes: 3,308 Protein-coding: 3,213 RNAs: 52 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VLKN01000001.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00001.1, whole genome shotgun sequence 693,000
NZ_VLKN01000002.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00002.2, whole genome shotgun sequence 617,268
NZ_VLKN01000003.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00003.3, whole genome shotgun sequence 591,234
NZ_VLKN01000004.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00004.4, whole genome shotgun sequence 464,899
NZ_VLKN01000005.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00005.5, whole genome shotgun sequence 333,568
NZ_VLKN01000006.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00006.6, whole genome shotgun sequence 270,141
NZ_VLKN01000007.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00007.7, whole genome shotgun sequence 172,207
NZ_VLKN01000008.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00008.8, whole genome shotgun sequence 95,594
NZ_VLKN01000009.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00009.9, whole genome shotgun sequence 68,548
NZ_VLKN01000010.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00010.10, whole genome shotgun sequence 47,386
NZ_VLKN01000011.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00011.11, whole genome shotgun sequence 44,287
NZ_VLKN01000012.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00012.12, whole genome shotgun sequence 41,805
NZ_VLKN01000013.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00013.13, whole genome shotgun sequence 32,212
NZ_VLKN01000014.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00014.14, whole genome shotgun sequence 23,788
NZ_VLKN01000015.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00015.15, whole genome shotgun sequence 16,482
NZ_VLKN01000016.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00016.16, whole genome shotgun sequence 11,139
NZ_VLKN01000017.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00017.17, whole genome shotgun sequence 9,099
NZ_VLKN01000018.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00018.18, whole genome shotgun sequence 5,985
NZ_VLKN01000019.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00019.19, whole genome shotgun sequence 2,660
NZ_VLKN01000020.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00020.20, whole genome shotgun sequence 2,591
NZ_VLKN01000021.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00021.21, whole genome shotgun sequence 1,678
NZ_VLKN01000022.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00022.22, whole genome shotgun sequence 1,629
NZ_VLKN01000023.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00023.23, whole genome shotgun sequence 1,323
NZ_VLKN01000024.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00024.24, whole genome shotgun sequence 1,216
NZ_VLKN01000025.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00025.25, whole genome shotgun sequence 1,238
NZ_VLKN01000026.1 Luteimonas cucumeris strain CGMCC 1.10821 IP90DRAFT_scaffold00026.26, whole genome shotgun sequence 1,114

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory