fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lysobacter_D ruishenii CGMCC 1.10136

Genome identifier: GCF_007830115.1

NCBI assembly name: ASM783011v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Lysobacter_D, Lysobacter_D ruishenii

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Lysobacter, Lysobacter ruishenii

Scaffolds: 28

Genes: 3,135 Protein-coding: 3,021 RNAs: 59 pseudogenes: 55

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VLKP01000001.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00001.1, whole genome shotgun sequence 479,159
NZ_VLKP01000002.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00002.2, whole genome shotgun sequence 397,071
NZ_VLKP01000003.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00003.3, whole genome shotgun sequence 374,716
NZ_VLKP01000004.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00004.4, whole genome shotgun sequence 254,996
NZ_VLKP01000005.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00005.5, whole genome shotgun sequence 240,765
NZ_VLKP01000006.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00006.6, whole genome shotgun sequence 213,539
NZ_VLKP01000007.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00007.7, whole genome shotgun sequence 204,922
NZ_VLKP01000008.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00008.8, whole genome shotgun sequence 193,433
NZ_VLKP01000009.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00009.9, whole genome shotgun sequence 167,468
NZ_VLKP01000010.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00010.10, whole genome shotgun sequence 159,452
NZ_VLKP01000011.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00011.11, whole genome shotgun sequence 135,409
NZ_VLKP01000012.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00012.12, whole genome shotgun sequence 89,361
NZ_VLKP01000013.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00013.13, whole genome shotgun sequence 75,497
NZ_VLKP01000014.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00014.14, whole genome shotgun sequence 73,331
NZ_VLKP01000015.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00015.15, whole genome shotgun sequence 66,138
NZ_VLKP01000016.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00016.16, whole genome shotgun sequence 43,029
NZ_VLKP01000017.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00017.17, whole genome shotgun sequence 42,315
NZ_VLKP01000018.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00018.18, whole genome shotgun sequence 30,434
NZ_VLKP01000019.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00019.19, whole genome shotgun sequence 27,736
NZ_VLKP01000020.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00020.20, whole genome shotgun sequence 20,259
NZ_VLKP01000021.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00021.21, whole genome shotgun sequence 17,422
NZ_VLKP01000022.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00022.22, whole genome shotgun sequence 11,625
NZ_VLKP01000023.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00023.23, whole genome shotgun sequence 11,561
NZ_VLKP01000024.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00024.24, whole genome shotgun sequence 10,160
NZ_VLKP01000025.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00025.25, whole genome shotgun sequence 9,937
NZ_VLKP01000026.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00026.26, whole genome shotgun sequence 6,808
NZ_VLKP01000027.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00027.27, whole genome shotgun sequence 1,575
NZ_VLKP01000028.1 Lysobacter ruishenii strain CGMCC 1.10136 IP93DRAFT_scaffold00028.28, whole genome shotgun sequence 1,241

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory