fast.genomicscompare 6,575 genera of bacteria & archaea

 

Azomonas agilis DSM 375

Genome identifier: GCF_007830255.1

NCBI assembly name: ASM783025v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Azomonas, Azomonas agilis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Azomonas, Azomonas agilis

Scaffolds: 22

Genes: 3,115 Protein-coding: 3,004 RNAs: 59 pseudogenes: 52

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VLKG01000001.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00001.1, whole genome shotgun sequence 502,936
NZ_VLKG01000002.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00002.2, whole genome shotgun sequence 488,671
NZ_VLKG01000003.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00003.3, whole genome shotgun sequence 326,157
NZ_VLKG01000004.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00004.4, whole genome shotgun sequence 294,736
NZ_VLKG01000005.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00005.5, whole genome shotgun sequence 261,193
NZ_VLKG01000006.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00006.6, whole genome shotgun sequence 215,705
NZ_VLKG01000007.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00007.7, whole genome shotgun sequence 197,109
NZ_VLKG01000008.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00008.8, whole genome shotgun sequence 167,347
NZ_VLKG01000009.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00009.9, whole genome shotgun sequence 166,359
NZ_VLKG01000010.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00010.10, whole genome shotgun sequence 106,563
NZ_VLKG01000011.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00011.11, whole genome shotgun sequence 105,631
NZ_VLKG01000012.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00012.12, whole genome shotgun sequence 91,523
NZ_VLKG01000013.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00013.13, whole genome shotgun sequence 69,388
NZ_VLKG01000014.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00014.14, whole genome shotgun sequence 66,700
NZ_VLKG01000015.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00015.15, whole genome shotgun sequence 64,495
NZ_VLKG01000016.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00016.16, whole genome shotgun sequence 52,779
NZ_VLKG01000017.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00017.17, whole genome shotgun sequence 35,749
NZ_VLKG01000018.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00018.18, whole genome shotgun sequence 34,445
NZ_VLKG01000019.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00019.19, whole genome shotgun sequence 17,505
NZ_VLKG01000020.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00020.20, whole genome shotgun sequence 4,197
NZ_VLKG01000021.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00021.21, whole genome shotgun sequence 4,032
NZ_VLKG01000022.1 Azomonas agilis strain DSM 375 LX59DRAFT_scaffold00022.22, whole genome shotgun sequence 3,603

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory