fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phaeobacter_A marinintestinus UB-M7

Genome identifier: GCF_007923355.1

NCBI assembly name: ASM792335v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Phaeobacter_A, Phaeobacter_A marinintestinus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Phaeobacter, Phaeobacter marinintestinus

Scaffolds: 64

Genes: 4,722 Protein-coding: 4,593 RNAs: 51 pseudogenes: 78

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VOGO01000001.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold1, whole genome shotgun sequence 862,929
NZ_VOGO01000002.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold2, whole genome shotgun sequence 583,144
NZ_VOGO01000003.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold3, whole genome shotgun sequence 550,752
NZ_VOGO01000004.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold4, whole genome shotgun sequence 409,424
NZ_VOGO01000005.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold5, whole genome shotgun sequence 349,847
NZ_VOGO01000006.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold6, whole genome shotgun sequence 336,755
NZ_VOGO01000007.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold7, whole genome shotgun sequence 305,259
NZ_VOGO01000008.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold8, whole genome shotgun sequence 196,647
NZ_VOGO01000009.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold9, whole genome shotgun sequence 196,195
NZ_VOGO01000010.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold10, whole genome shotgun sequence 167,481
NZ_VOGO01000011.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold11, whole genome shotgun sequence 127,035
NZ_VOGO01000012.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold12, whole genome shotgun sequence 113,998
NZ_VOGO01000013.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold13, whole genome shotgun sequence 94,549
NZ_VOGO01000014.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold14, whole genome shotgun sequence 93,742
NZ_VOGO01000015.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold15, whole genome shotgun sequence 77,702
NZ_VOGO01000016.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold16, whole genome shotgun sequence 66,069
NZ_VOGO01000017.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold17, whole genome shotgun sequence 63,284
NZ_VOGO01000018.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold18, whole genome shotgun sequence 59,940
NZ_VOGO01000019.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold19, whole genome shotgun sequence 59,255
NZ_VOGO01000020.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold20, whole genome shotgun sequence 57,291
NZ_VOGO01000021.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold21, whole genome shotgun sequence 24,827
NZ_VOGO01000022.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold22, whole genome shotgun sequence 18,506
NZ_VOGO01000023.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold23, whole genome shotgun sequence 14,714
NZ_VOGO01000024.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold24, whole genome shotgun sequence 11,546
NZ_VOGO01000025.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold25, whole genome shotgun sequence 8,883
NZ_VOGO01000026.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold26, whole genome shotgun sequence 8,590
NZ_VOGO01000027.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold27, whole genome shotgun sequence 7,399
NZ_VOGO01000028.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold28, whole genome shotgun sequence 6,466
NZ_VOGO01000029.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold29, whole genome shotgun sequence 5,826
NZ_VOGO01000030.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold30, whole genome shotgun sequence 5,529
NZ_VOGO01000031.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold31, whole genome shotgun sequence 4,933
NZ_VOGO01000032.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold32, whole genome shotgun sequence 4,499
NZ_VOGO01000033.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold33, whole genome shotgun sequence 3,827
NZ_VOGO01000034.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold34, whole genome shotgun sequence 3,503
NZ_VOGO01000035.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold35, whole genome shotgun sequence 3,211
NZ_VOGO01000036.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold36, whole genome shotgun sequence 3,142
NZ_VOGO01000037.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold37, whole genome shotgun sequence 3,089
NZ_VOGO01000038.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold38, whole genome shotgun sequence 2,532
NZ_VOGO01000039.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold39, whole genome shotgun sequence 2,293
NZ_VOGO01000040.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold40, whole genome shotgun sequence 2,196
NZ_VOGO01000041.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold41, whole genome shotgun sequence 1,970
NZ_VOGO01000042.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold42, whole genome shotgun sequence 1,944
NZ_VOGO01000043.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold43, whole genome shotgun sequence 1,803
NZ_VOGO01000044.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold44, whole genome shotgun sequence 1,659
NZ_VOGO01000045.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold45, whole genome shotgun sequence 1,628
NZ_VOGO01000046.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold46, whole genome shotgun sequence 1,605
NZ_VOGO01000047.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold47, whole genome shotgun sequence 1,595
NZ_VOGO01000048.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold48, whole genome shotgun sequence 1,462
NZ_VOGO01000049.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold49, whole genome shotgun sequence 1,314
NZ_VOGO01000050.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold50, whole genome shotgun sequence 1,110
NZ_VOGO01000051.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold51, whole genome shotgun sequence 962
NZ_VOGO01000052.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold52, whole genome shotgun sequence 955
NZ_VOGO01000053.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold53, whole genome shotgun sequence 924
NZ_VOGO01000054.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold54, whole genome shotgun sequence 898
NZ_VOGO01000055.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold55, whole genome shotgun sequence 875
NZ_VOGO01000056.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold56, whole genome shotgun sequence 868
NZ_VOGO01000057.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold57, whole genome shotgun sequence 859
NZ_VOGO01000058.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold58, whole genome shotgun sequence 843
NZ_VOGO01000059.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold59, whole genome shotgun sequence 831
NZ_VOGO01000060.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold60, whole genome shotgun sequence 816
NZ_VOGO01000061.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold61, whole genome shotgun sequence 252
NZ_VOGO01000062.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold62, whole genome shotgun sequence 534
NZ_VOGO01000063.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold63, whole genome shotgun sequence 520
NZ_VOGO01000064.1 Phaeobacter marinintestinus strain UB-M7 UB-M7_scaffold64, whole genome shotgun sequence 502

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory