fast.genomicscompare 6,575 genera of bacteria & archaea

 

SW4 sp002732825 SW4

Genome identifier: GCF_008065155.1

NCBI assembly name: ASM806515v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, SW4, SW4 sp002732825

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Octadecabacter

Scaffolds: 3

Genes: 3,550 Protein-coding: 3,423 RNAs: 48 pseudogenes: 79

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP042819.1 Octadecabacter sp. SW4 chromosome, complete genome 3,328,778
NZ_CP042820.1 Octadecabacter sp. SW4 plasmid pow41, complete sequence 108,352
NZ_CP042821.1 Octadecabacter sp. SW4 plasmid pow42, complete sequence 103,883

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory