fast.genomicscompare 6,575 genera of bacteria & archaea

 

Oceanicella actignis DSM 22673

Genome identifier: GCF_008124525.1

NCBI assembly name: ASM812452v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Oceanicella, Oceanicella actignis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Oceanicella, Oceanicella actignis

Scaffolds: 35

Genes: 3,017 Protein-coding: 2,910 RNAs: 52 pseudogenes: 55

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VNHJ01000001.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00001.1, whole genome shotgun sequence 594,119
NZ_VNHJ01000002.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00002.2, whole genome shotgun sequence 568,705
NZ_VNHJ01000003.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00003.3, whole genome shotgun sequence 392,523
NZ_VNHJ01000004.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00004.4, whole genome shotgun sequence 268,768
NZ_VNHJ01000005.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00005.5, whole genome shotgun sequence 229,371
NZ_VNHJ01000006.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00006.6, whole genome shotgun sequence 209,318
NZ_VNHJ01000007.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00007.7, whole genome shotgun sequence 207,591
NZ_VNHJ01000008.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00008.8, whole genome shotgun sequence 190,907
NZ_VNHJ01000009.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00009.9, whole genome shotgun sequence 154,369
NZ_VNHJ01000010.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00010.10, whole genome shotgun sequence 114,281
NZ_VNHJ01000011.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00011.11, whole genome shotgun sequence 101,784
NZ_VNHJ01000012.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00012.12, whole genome shotgun sequence 81,138
NZ_VNHJ01000013.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00013.13, whole genome shotgun sequence 24,826
NZ_VNHJ01000014.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00014.14, whole genome shotgun sequence 22,380
NZ_VNHJ01000015.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00015.15, whole genome shotgun sequence 20,876
NZ_VNHJ01000016.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00016.16, whole genome shotgun sequence 18,864
NZ_VNHJ01000017.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00017.17, whole genome shotgun sequence 14,554
NZ_VNHJ01000018.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00018.18, whole genome shotgun sequence 13,379
NZ_VNHJ01000019.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00019.19, whole genome shotgun sequence 8,383
NZ_VNHJ01000020.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00020.20, whole genome shotgun sequence 5,417
NZ_VNHJ01000021.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00021.21, whole genome shotgun sequence 5,073
NZ_VNHJ01000022.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00022.22, whole genome shotgun sequence 5,059
NZ_VNHJ01000023.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00023.23, whole genome shotgun sequence 4,810
NZ_VNHJ01000024.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00024.24, whole genome shotgun sequence 3,744
NZ_VNHJ01000025.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00025.25, whole genome shotgun sequence 3,439
NZ_VNHJ01000026.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00026.26, whole genome shotgun sequence 3,392
NZ_VNHJ01000027.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00027.27, whole genome shotgun sequence 2,792
NZ_VNHJ01000028.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00028.28, whole genome shotgun sequence 2,442
NZ_VNHJ01000029.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00029.29, whole genome shotgun sequence 1,973
NZ_VNHJ01000030.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00030.30, whole genome shotgun sequence 1,638
NZ_VNHJ01000031.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00031.31, whole genome shotgun sequence 1,547
NZ_VNHJ01000032.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00032.32, whole genome shotgun sequence 1,417
NZ_VNHJ01000033.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00033.33, whole genome shotgun sequence 1,384
NZ_VNHJ01000034.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00034.34, whole genome shotgun sequence 1,288
NZ_VNHJ01000035.1 Oceanicella actignis strain DSM 22673 LY05DRAFT_scaffold00035.35, whole genome shotgun sequence 1,122

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory