fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pareuzebyella sediminis S2-4-21

Genome identifier: GCF_008367235.1

NCBI assembly name: ASM836723v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Pareuzebyella, Pareuzebyella sediminis

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Pareuzebyella, Pareuzebyella sediminis

Scaffolds: 20

Genes: 4,102 Protein-coding: 4,049 RNAs: 44 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VTZS01000001.1 Pareuzebyella sediminis strain S2-4-21 NODE_1_length_1574046_cov_69.6972, whole genome shotgun sequence 1,574,046
NZ_VTZS01000002.1 Pareuzebyella sediminis strain S2-4-21 NODE_2_length_982853_cov_71.3278, whole genome shotgun sequence 982,853
NZ_VTZS01000003.1 Pareuzebyella sediminis strain S2-4-21 NODE_3_length_848906_cov_71.7626, whole genome shotgun sequence 848,906
NZ_VTZS01000004.1 Pareuzebyella sediminis strain S2-4-21 NODE_4_length_498192_cov_71.6257, whole genome shotgun sequence 498,192
NZ_VTZS01000005.1 Pareuzebyella sediminis strain S2-4-21 NODE_5_length_390162_cov_72.1897, whole genome shotgun sequence 390,162
NZ_VTZS01000006.1 Pareuzebyella sediminis strain S2-4-21 NODE_6_length_332057_cov_70.0476, whole genome shotgun sequence 332,057
NZ_VTZS01000007.1 Pareuzebyella sediminis strain S2-4-21 NODE_7_length_104979_cov_70.759, whole genome shotgun sequence 104,979
NZ_VTZS01000008.1 Pareuzebyella sediminis strain S2-4-21 NODE_8_length_92038_cov_70.8334, whole genome shotgun sequence 92,038
NZ_VTZS01000009.1 Pareuzebyella sediminis strain S2-4-21 NODE_9_length_14851_cov_75.6697, whole genome shotgun sequence 14,851
NZ_VTZS01000010.1 Pareuzebyella sediminis strain S2-4-21 NODE_10_length_11676_cov_83.7719, whole genome shotgun sequence 11,676
NZ_VTZS01000011.1 Pareuzebyella sediminis strain S2-4-21 NODE_11_length_11078_cov_70.9861, whole genome shotgun sequence 11,078
NZ_VTZS01000012.1 Pareuzebyella sediminis strain S2-4-21 NODE_12_length_10265_cov_73.4118, whole genome shotgun sequence 10,265
NZ_VTZS01000013.1 Pareuzebyella sediminis strain S2-4-21 NODE_13_length_8511_cov_70.8562, whole genome shotgun sequence 8,511
NZ_VTZS01000014.1 Pareuzebyella sediminis strain S2-4-21 NODE_14_length_8390_cov_71.4547, whole genome shotgun sequence 8,390
NZ_VTZS01000015.1 Pareuzebyella sediminis strain S2-4-21 NODE_15_length_5507_cov_168.872, whole genome shotgun sequence 5,507
NZ_VTZS01000016.1 Pareuzebyella sediminis strain S2-4-21 NODE_16_length_4748_cov_68.9447, whole genome shotgun sequence 4,748
NZ_VTZS01000017.1 Pareuzebyella sediminis strain S2-4-21 NODE_17_length_3720_cov_85.9818, whole genome shotgun sequence 3,720
NZ_VTZS01000018.1 Pareuzebyella sediminis strain S2-4-21 NODE_19_length_2559_cov_74.5073, whole genome shotgun sequence 2,559
NZ_VTZS01000019.1 Pareuzebyella sediminis strain S2-4-21 NODE_24_length_1316_cov_141.663, whole genome shotgun sequence 1,316
NZ_VTZS01000020.1 Pareuzebyella sediminis strain S2-4-21 NODE_26_length_1194_cov_295.719, whole genome shotgun sequence 1,194

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory