fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phaeocystidibacter luteus LMG 25704

Genome identifier: GCF_008933115.1

NCBI assembly name: ASM893311v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Schleiferiaceae, Phaeocystidibacter, Phaeocystidibacter luteus

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Schleiferiaceae, Phaeocystidibacter, Phaeocystidibacter luteus

Scaffolds: 27

Genes: 2,854 Protein-coding: 2,812 RNAs: 39 pseudogenes: 3

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WBVO01000001.1 Phaeocystidibacter luteus strain LMG 25704 1, whole genome shotgun sequence 842,670
NZ_WBVO01000002.1 Phaeocystidibacter luteus strain LMG 25704 2, whole genome shotgun sequence 356,296
NZ_WBVO01000003.1 Phaeocystidibacter luteus strain LMG 25704 3, whole genome shotgun sequence 254,576
NZ_WBVO01000004.1 Phaeocystidibacter luteus strain LMG 25704 4, whole genome shotgun sequence 200,223
NZ_WBVO01000005.1 Phaeocystidibacter luteus strain LMG 25704 5, whole genome shotgun sequence 197,053
NZ_WBVO01000006.1 Phaeocystidibacter luteus strain LMG 25704 6, whole genome shotgun sequence 196,187
NZ_WBVO01000007.1 Phaeocystidibacter luteus strain LMG 25704 7, whole genome shotgun sequence 179,006
NZ_WBVO01000008.1 Phaeocystidibacter luteus strain LMG 25704 8, whole genome shotgun sequence 162,539
NZ_WBVO01000009.1 Phaeocystidibacter luteus strain LMG 25704 9, whole genome shotgun sequence 146,733
NZ_WBVO01000010.1 Phaeocystidibacter luteus strain LMG 25704 10, whole genome shotgun sequence 133,967
NZ_WBVO01000011.1 Phaeocystidibacter luteus strain LMG 25704 11, whole genome shotgun sequence 108,482
NZ_WBVO01000012.1 Phaeocystidibacter luteus strain LMG 25704 12, whole genome shotgun sequence 92,549
NZ_WBVO01000013.1 Phaeocystidibacter luteus strain LMG 25704 13, whole genome shotgun sequence 89,554
NZ_WBVO01000014.1 Phaeocystidibacter luteus strain LMG 25704 14, whole genome shotgun sequence 82,861
NZ_WBVO01000015.1 Phaeocystidibacter luteus strain LMG 25704 15, whole genome shotgun sequence 75,688
NZ_WBVO01000016.1 Phaeocystidibacter luteus strain LMG 25704 16, whole genome shotgun sequence 37,078
NZ_WBVO01000017.1 Phaeocystidibacter luteus strain LMG 25704 17, whole genome shotgun sequence 17,821
NZ_WBVO01000018.1 Phaeocystidibacter luteus strain LMG 25704 18, whole genome shotgun sequence 16,087
NZ_WBVO01000019.1 Phaeocystidibacter luteus strain LMG 25704 19, whole genome shotgun sequence 11,443
NZ_WBVO01000020.1 Phaeocystidibacter luteus strain LMG 25704 20, whole genome shotgun sequence 5,542
NZ_WBVO01000021.1 Phaeocystidibacter luteus strain LMG 25704 21, whole genome shotgun sequence 1,840
NZ_WBVO01000022.1 Phaeocystidibacter luteus strain LMG 25704 22, whole genome shotgun sequence 1,388
NZ_WBVO01000023.1 Phaeocystidibacter luteus strain LMG 25704 23, whole genome shotgun sequence 1,257
NZ_WBVO01000024.1 Phaeocystidibacter luteus strain LMG 25704 24, whole genome shotgun sequence 1,204
NZ_WBVO01000025.1 Phaeocystidibacter luteus strain LMG 25704 25, whole genome shotgun sequence 616
NZ_WBVO01000026.1 Phaeocystidibacter luteus strain LMG 25704 26, whole genome shotgun sequence 476
NZ_WBVO01000027.1 Phaeocystidibacter luteus strain LMG 25704 27, whole genome shotgun sequence 245

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory