fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkalibaculum_A sporogenes M08 DMB

Genome identifier: GCF_009362815.1

NCBI assembly name: ASM936281v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Eubacteriales, Alkalibacteraceae, Alkalibaculum_A, Alkalibaculum_A sporogenes

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Alkalibaculum, Alkalibaculum sporogenes

Scaffolds: 93

Genes: 3,411 Protein-coding: 3,182 RNAs: 65 pseudogenes: 164

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_WHNX01000001.1 Alkalibaculum sporogenes strain M08 DMB NODE_1_length_227951_cov_7.534623, whole genome shotgun sequence 227,951
NZ_WHNX01000002.1 Alkalibaculum sporogenes strain M08 DMB NODE_2_length_219751_cov_7.309053, whole genome shotgun sequence 219,751
NZ_WHNX01000003.1 Alkalibaculum sporogenes strain M08 DMB NODE_3_length_204331_cov_7.553929, whole genome shotgun sequence 204,331
NZ_WHNX01000004.1 Alkalibaculum sporogenes strain M08 DMB NODE_4_length_180999_cov_7.694362, whole genome shotgun sequence 180,999
NZ_WHNX01000005.1 Alkalibaculum sporogenes strain M08 DMB NODE_5_length_174451_cov_8.135318, whole genome shotgun sequence 174,451
NZ_WHNX01000006.1 Alkalibaculum sporogenes strain M08 DMB NODE_6_length_168520_cov_7.206031, whole genome shotgun sequence 168,520
NZ_WHNX01000007.1 Alkalibaculum sporogenes strain M08 DMB NODE_7_length_162589_cov_7.943726, whole genome shotgun sequence 162,589
NZ_WHNX01000008.1 Alkalibaculum sporogenes strain M08 DMB NODE_8_length_141425_cov_7.989974, whole genome shotgun sequence 141,425
NZ_WHNX01000009.1 Alkalibaculum sporogenes strain M08 DMB NODE_9_length_128957_cov_7.848593, whole genome shotgun sequence 128,957
NZ_WHNX01000010.1 Alkalibaculum sporogenes strain M08 DMB NODE_10_length_118626_cov_7.369739, whole genome shotgun sequence 118,626
NZ_WHNX01000011.1 Alkalibaculum sporogenes strain M08 DMB NODE_11_length_112484_cov_7.325906, whole genome shotgun sequence 112,484
NZ_WHNX01000012.1 Alkalibaculum sporogenes strain M08 DMB NODE_12_length_109457_cov_7.874696, whole genome shotgun sequence 109,457
NZ_WHNX01000013.1 Alkalibaculum sporogenes strain M08 DMB NODE_13_length_106284_cov_7.050487, whole genome shotgun sequence 106,284
NZ_WHNX01000014.1 Alkalibaculum sporogenes strain M08 DMB NODE_14_length_85546_cov_7.741524, whole genome shotgun sequence 85,546
NZ_WHNX01000015.1 Alkalibaculum sporogenes strain M08 DMB NODE_15_length_83576_cov_7.993867, whole genome shotgun sequence 83,576
NZ_WHNX01000016.1 Alkalibaculum sporogenes strain M08 DMB NODE_16_length_73138_cov_7.360136, whole genome shotgun sequence 73,138
NZ_WHNX01000017.1 Alkalibaculum sporogenes strain M08 DMB NODE_17_length_62960_cov_7.667393, whole genome shotgun sequence 62,960
NZ_WHNX01000018.1 Alkalibaculum sporogenes strain M08 DMB NODE_18_length_58673_cov_7.608478, whole genome shotgun sequence 58,673
NZ_WHNX01000019.1 Alkalibaculum sporogenes strain M08 DMB NODE_19_length_54817_cov_7.607186, whole genome shotgun sequence 54,817
NZ_WHNX01000020.1 Alkalibaculum sporogenes strain M08 DMB NODE_20_length_54214_cov_7.605969, whole genome shotgun sequence 54,214
NZ_WHNX01000021.1 Alkalibaculum sporogenes strain M08 DMB NODE_21_length_51374_cov_7.578333, whole genome shotgun sequence 51,374
NZ_WHNX01000022.1 Alkalibaculum sporogenes strain M08 DMB NODE_22_length_50373_cov_7.856765, whole genome shotgun sequence 50,373
NZ_WHNX01000023.1 Alkalibaculum sporogenes strain M08 DMB NODE_23_length_48318_cov_7.759659, whole genome shotgun sequence 48,318
NZ_WHNX01000024.1 Alkalibaculum sporogenes strain M08 DMB NODE_24_length_41130_cov_7.999342, whole genome shotgun sequence 41,130
NZ_WHNX01000025.1 Alkalibaculum sporogenes strain M08 DMB NODE_25_length_40501_cov_8.265804, whole genome shotgun sequence 40,501
NZ_WHNX01000026.1 Alkalibaculum sporogenes strain M08 DMB NODE_26_length_35675_cov_7.269283, whole genome shotgun sequence 35,675
NZ_WHNX01000027.1 Alkalibaculum sporogenes strain M08 DMB NODE_27_length_34252_cov_7.656458, whole genome shotgun sequence 34,252
NZ_WHNX01000028.1 Alkalibaculum sporogenes strain M08 DMB NODE_28_length_33117_cov_7.631383, whole genome shotgun sequence 33,117
NZ_WHNX01000029.1 Alkalibaculum sporogenes strain M08 DMB NODE_29_length_30966_cov_8.651116, whole genome shotgun sequence 30,966
NZ_WHNX01000030.1 Alkalibaculum sporogenes strain M08 DMB NODE_30_length_28591_cov_7.954092, whole genome shotgun sequence 28,591
NZ_WHNX01000031.1 Alkalibaculum sporogenes strain M08 DMB NODE_31_length_27515_cov_7.570105, whole genome shotgun sequence 27,515
NZ_WHNX01000032.1 Alkalibaculum sporogenes strain M08 DMB NODE_32_length_26040_cov_7.587101, whole genome shotgun sequence 26,040
NZ_WHNX01000033.1 Alkalibaculum sporogenes strain M08 DMB NODE_33_length_24682_cov_7.204043, whole genome shotgun sequence 24,682
NZ_WHNX01000034.1 Alkalibaculum sporogenes strain M08 DMB NODE_34_length_24551_cov_7.503558, whole genome shotgun sequence 24,551
NZ_WHNX01000035.1 Alkalibaculum sporogenes strain M08 DMB NODE_35_length_23752_cov_8.025494, whole genome shotgun sequence 23,752
NZ_WHNX01000036.1 Alkalibaculum sporogenes strain M08 DMB NODE_36_length_23536_cov_7.550369, whole genome shotgun sequence 23,536
NZ_WHNX01000037.1 Alkalibaculum sporogenes strain M08 DMB NODE_37_length_22901_cov_7.533287, whole genome shotgun sequence 22,901
NZ_WHNX01000038.1 Alkalibaculum sporogenes strain M08 DMB NODE_38_length_22363_cov_7.304438, whole genome shotgun sequence 22,363
NZ_WHNX01000039.1 Alkalibaculum sporogenes strain M08 DMB NODE_39_length_20822_cov_7.568354, whole genome shotgun sequence 20,822
NZ_WHNX01000040.1 Alkalibaculum sporogenes strain M08 DMB NODE_40_length_19446_cov_7.822918, whole genome shotgun sequence 19,446
NZ_WHNX01000041.1 Alkalibaculum sporogenes strain M08 DMB NODE_41_length_19381_cov_7.842392, whole genome shotgun sequence 19,381
NZ_WHNX01000042.1 Alkalibaculum sporogenes strain M08 DMB NODE_42_length_19011_cov_7.913970, whole genome shotgun sequence 19,011
NZ_WHNX01000043.1 Alkalibaculum sporogenes strain M08 DMB NODE_43_length_17681_cov_7.380617, whole genome shotgun sequence 17,681
NZ_WHNX01000044.1 Alkalibaculum sporogenes strain M08 DMB NODE_44_length_16626_cov_7.622315, whole genome shotgun sequence 16,626
NZ_WHNX01000045.1 Alkalibaculum sporogenes strain M08 DMB NODE_45_length_15839_cov_7.950826, whole genome shotgun sequence 15,839
NZ_WHNX01000046.1 Alkalibaculum sporogenes strain M08 DMB NODE_46_length_15410_cov_8.041408, whole genome shotgun sequence 15,410
NZ_WHNX01000047.1 Alkalibaculum sporogenes strain M08 DMB NODE_47_length_15320_cov_7.660272, whole genome shotgun sequence 15,320
NZ_WHNX01000048.1 Alkalibaculum sporogenes strain M08 DMB NODE_48_length_14323_cov_7.425197, whole genome shotgun sequence 14,323
NZ_WHNX01000049.1 Alkalibaculum sporogenes strain M08 DMB NODE_49_length_13399_cov_7.969774, whole genome shotgun sequence 13,399
NZ_WHNX01000050.1 Alkalibaculum sporogenes strain M08 DMB NODE_50_length_12809_cov_7.822187, whole genome shotgun sequence 12,809
NZ_WHNX01000051.1 Alkalibaculum sporogenes strain M08 DMB NODE_51_length_11361_cov_8.135411, whole genome shotgun sequence 11,361
NZ_WHNX01000052.1 Alkalibaculum sporogenes strain M08 DMB NODE_52_length_11109_cov_7.858946, whole genome shotgun sequence 11,109
NZ_WHNX01000053.1 Alkalibaculum sporogenes strain M08 DMB NODE_53_length_11072_cov_7.366172, whole genome shotgun sequence 11,072
NZ_WHNX01000054.1 Alkalibaculum sporogenes strain M08 DMB NODE_54_length_10345_cov_8.032012, whole genome shotgun sequence 10,345
NZ_WHNX01000055.1 Alkalibaculum sporogenes strain M08 DMB NODE_55_length_10118_cov_7.570616, whole genome shotgun sequence 10,118
NZ_WHNX01000056.1 Alkalibaculum sporogenes strain M08 DMB NODE_56_length_9774_cov_8.601654, whole genome shotgun sequence 9,774
NZ_WHNX01000057.1 Alkalibaculum sporogenes strain M08 DMB NODE_57_length_9670_cov_7.798663, whole genome shotgun sequence 9,670
NZ_WHNX01000058.1 Alkalibaculum sporogenes strain M08 DMB NODE_58_length_9166_cov_7.475019, whole genome shotgun sequence 9,166
NZ_WHNX01000059.1 Alkalibaculum sporogenes strain M08 DMB NODE_59_length_8390_cov_7.590037, whole genome shotgun sequence 8,390
NZ_WHNX01000060.1 Alkalibaculum sporogenes strain M08 DMB NODE_60_length_8180_cov_8.299839, whole genome shotgun sequence 8,180
NZ_WHNX01000061.1 Alkalibaculum sporogenes strain M08 DMB NODE_61_length_6984_cov_7.564851, whole genome shotgun sequence 6,984
NZ_WHNX01000062.1 Alkalibaculum sporogenes strain M08 DMB NODE_62_length_6948_cov_8.499197, whole genome shotgun sequence 6,948
NZ_WHNX01000063.1 Alkalibaculum sporogenes strain M08 DMB NODE_63_length_6749_cov_7.661203, whole genome shotgun sequence 6,749
NZ_WHNX01000064.1 Alkalibaculum sporogenes strain M08 DMB NODE_64_length_6021_cov_7.649274, whole genome shotgun sequence 6,021
NZ_WHNX01000065.1 Alkalibaculum sporogenes strain M08 DMB NODE_65_length_5979_cov_8.034014, whole genome shotgun sequence 5,979
NZ_WHNX01000066.1 Alkalibaculum sporogenes strain M08 DMB NODE_66_length_5698_cov_8.201465, whole genome shotgun sequence 5,698
NZ_WHNX01000067.1 Alkalibaculum sporogenes strain M08 DMB NODE_67_length_5280_cov_8.117931, whole genome shotgun sequence 5,280
NZ_WHNX01000068.1 Alkalibaculum sporogenes strain M08 DMB NODE_68_length_4932_cov_7.213532, whole genome shotgun sequence 4,932
NZ_WHNX01000069.1 Alkalibaculum sporogenes strain M08 DMB NODE_69_length_3848_cov_7.926647, whole genome shotgun sequence 3,848
NZ_WHNX01000070.1 Alkalibaculum sporogenes strain M08 DMB NODE_70_length_3135_cov_42.903821, whole genome shotgun sequence 3,135
NZ_WHNX01000071.1 Alkalibaculum sporogenes strain M08 DMB NODE_71_length_2455_cov_9.921477, whole genome shotgun sequence 2,455
NZ_WHNX01000072.1 Alkalibaculum sporogenes strain M08 DMB NODE_72_length_2387_cov_7.208769, whole genome shotgun sequence 2,387
NZ_WHNX01000073.1 Alkalibaculum sporogenes strain M08 DMB NODE_73_length_2374_cov_22.828571, whole genome shotgun sequence 2,374
NZ_WHNX01000074.1 Alkalibaculum sporogenes strain M08 DMB NODE_74_length_2176_cov_7.744824, whole genome shotgun sequence 2,176
NZ_WHNX01000075.1 Alkalibaculum sporogenes strain M08 DMB NODE_75_length_2139_cov_15.053431, whole genome shotgun sequence 2,139
NZ_WHNX01000076.1 Alkalibaculum sporogenes strain M08 DMB NODE_76_length_1930_cov_7.596942, whole genome shotgun sequence 1,930
NZ_WHNX01000077.1 Alkalibaculum sporogenes strain M08 DMB NODE_78_length_1608_cov_46.728960, whole genome shotgun sequence 1,608
NZ_WHNX01000078.1 Alkalibaculum sporogenes strain M08 DMB NODE_79_length_1531_cov_53.379888, whole genome shotgun sequence 1,531
NZ_WHNX01000079.1 Alkalibaculum sporogenes strain M08 DMB NODE_80_length_1487_cov_7.328530, whole genome shotgun sequence 1,487
NZ_WHNX01000080.1 Alkalibaculum sporogenes strain M08 DMB NODE_81_length_1464_cov_41.747253, whole genome shotgun sequence 1,464
NZ_WHNX01000081.1 Alkalibaculum sporogenes strain M08 DMB NODE_82_length_1336_cov_36.907033, whole genome shotgun sequence 1,336
NZ_WHNX01000082.1 Alkalibaculum sporogenes strain M08 DMB NODE_83_length_1309_cov_7.327273, whole genome shotgun sequence 1,309
NZ_WHNX01000083.1 Alkalibaculum sporogenes strain M08 DMB NODE_84_length_1305_cov_25.674129, whole genome shotgun sequence 1,305
NZ_WHNX01000084.1 Alkalibaculum sporogenes strain M08 DMB NODE_85_length_1217_cov_13.491950, whole genome shotgun sequence 1,217
NZ_WHNX01000085.1 Alkalibaculum sporogenes strain M08 DMB NODE_86_length_1124_cov_31.445854, whole genome shotgun sequence 1,124
NZ_WHNX01000086.1 Alkalibaculum sporogenes strain M08 DMB NODE_87_length_1055_cov_7.237448, whole genome shotgun sequence 1,055
NZ_WHNX01000087.1 Alkalibaculum sporogenes strain M08 DMB NODE_88_length_1021_cov_15.528200, whole genome shotgun sequence 1,021
NZ_WHNX01000088.1 Alkalibaculum sporogenes strain M08 DMB NODE_89_length_1009_cov_15.676923, whole genome shotgun sequence 1,009
NZ_WHNX01000089.1 Alkalibaculum sporogenes strain M08 DMB NODE_90_length_930_cov_7.937425, whole genome shotgun sequence 930
NZ_WHNX01000090.1 Alkalibaculum sporogenes strain M08 DMB NODE_91_length_803_cov_33.271307, whole genome shotgun sequence 803
NZ_WHNX01000091.1 Alkalibaculum sporogenes strain M08 DMB NODE_92_length_747_cov_8.047840, whole genome shotgun sequence 747
NZ_WHNX01000092.1 Alkalibaculum sporogenes strain M08 DMB NODE_93_length_703_cov_12.584437, whole genome shotgun sequence 703
NZ_WHNX01000093.1 Alkalibaculum sporogenes strain M08 DMB NODE_94_length_672_cov_8.837696, whole genome shotgun sequence 672

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory