fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aggregicoccus sp009659535 17bor-14

Genome identifier: GCF_009659535.1

NCBI assembly name: ASM965953v1

GTDB taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Myxococcaceae, Aggregicoccus, Aggregicoccus sp009659535

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Myxococcaceae, Aggregicoccus

Scaffolds: 38

Genes: 6,016 Protein-coding: 5,748 RNAs: 55 pseudogenes: 213

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_VJZZ01000001.1 Aggregicoccus sp. 17bor-14 contig1, whole genome shotgun sequence 872,589
NZ_VJZZ01000002.1 Aggregicoccus sp. 17bor-14 contig2, whole genome shotgun sequence 621,232
NZ_VJZZ01000003.1 Aggregicoccus sp. 17bor-14 contig3, whole genome shotgun sequence 530,808
NZ_VJZZ01000004.1 Aggregicoccus sp. 17bor-14 contig4, whole genome shotgun sequence 499,584
NZ_VJZZ01000005.1 Aggregicoccus sp. 17bor-14 contig5, whole genome shotgun sequence 421,094
NZ_VJZZ01000006.1 Aggregicoccus sp. 17bor-14 contig6, whole genome shotgun sequence 398,188
NZ_VJZZ01000007.1 Aggregicoccus sp. 17bor-14 contig7, whole genome shotgun sequence 386,519
NZ_VJZZ01000008.1 Aggregicoccus sp. 17bor-14 contig8, whole genome shotgun sequence 380,081
NZ_VJZZ01000009.1 Aggregicoccus sp. 17bor-14 contig9, whole genome shotgun sequence 301,881
NZ_VJZZ01000010.1 Aggregicoccus sp. 17bor-14 contig10, whole genome shotgun sequence 296,070
NZ_VJZZ01000011.1 Aggregicoccus sp. 17bor-14 contig11, whole genome shotgun sequence 270,022
NZ_VJZZ01000012.1 Aggregicoccus sp. 17bor-14 contig12, whole genome shotgun sequence 260,516
NZ_VJZZ01000013.1 Aggregicoccus sp. 17bor-14 contig13, whole genome shotgun sequence 181,632
NZ_VJZZ01000014.1 Aggregicoccus sp. 17bor-14 contig14, whole genome shotgun sequence 168,561
NZ_VJZZ01000015.1 Aggregicoccus sp. 17bor-14 contig15, whole genome shotgun sequence 161,553
NZ_VJZZ01000016.1 Aggregicoccus sp. 17bor-14 contig16, whole genome shotgun sequence 145,258
NZ_VJZZ01000017.1 Aggregicoccus sp. 17bor-14 contig17, whole genome shotgun sequence 144,623
NZ_VJZZ01000018.1 Aggregicoccus sp. 17bor-14 contig18, whole genome shotgun sequence 121,850
NZ_VJZZ01000019.1 Aggregicoccus sp. 17bor-14 contig19, whole genome shotgun sequence 118,513
NZ_VJZZ01000020.1 Aggregicoccus sp. 17bor-14 contig20, whole genome shotgun sequence 113,826
NZ_VJZZ01000021.1 Aggregicoccus sp. 17bor-14 contig21, whole genome shotgun sequence 97,190
NZ_VJZZ01000022.1 Aggregicoccus sp. 17bor-14 contig22, whole genome shotgun sequence 93,714
NZ_VJZZ01000023.1 Aggregicoccus sp. 17bor-14 contig23, whole genome shotgun sequence 91,907
NZ_VJZZ01000024.1 Aggregicoccus sp. 17bor-14 contig24, whole genome shotgun sequence 89,568
NZ_VJZZ01000025.1 Aggregicoccus sp. 17bor-14 contig25, whole genome shotgun sequence 67,598
NZ_VJZZ01000026.1 Aggregicoccus sp. 17bor-14 contig26, whole genome shotgun sequence 49,197
NZ_VJZZ01000027.1 Aggregicoccus sp. 17bor-14 contig27, whole genome shotgun sequence 13,325
NZ_VJZZ01000028.1 Aggregicoccus sp. 17bor-14 contig28, whole genome shotgun sequence 8,519
NZ_VJZZ01000029.1 Aggregicoccus sp. 17bor-14 contig29, whole genome shotgun sequence 6,057
NZ_VJZZ01000030.1 Aggregicoccus sp. 17bor-14 contig30, whole genome shotgun sequence 2,537
NZ_VJZZ01000031.1 Aggregicoccus sp. 17bor-14 contig31, whole genome shotgun sequence 2,336
NZ_VJZZ01000032.1 Aggregicoccus sp. 17bor-14 contig32, whole genome shotgun sequence 1,541
NZ_VJZZ01000033.1 Aggregicoccus sp. 17bor-14 contig33, whole genome shotgun sequence 1,532
NZ_VJZZ01000034.1 Aggregicoccus sp. 17bor-14 contig34, whole genome shotgun sequence 1,497
NZ_VJZZ01000035.1 Aggregicoccus sp. 17bor-14 contig35, whole genome shotgun sequence 1,492
NZ_VJZZ01000036.1 Aggregicoccus sp. 17bor-14 contig36, whole genome shotgun sequence 1,489
NZ_VJZZ01000037.1 Aggregicoccus sp. 17bor-14 contig37, whole genome shotgun sequence 1,231
NZ_VJZZ01000038.1 Aggregicoccus sp. 17bor-14 contig38, whole genome shotgun sequence 1,066

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory